Literature DB >> 11983401

The interactions of nucleic acids at elevated hydrostatic pressure.

Robert B Macgregor1.   

Abstract

The application of elevated hydrostatic pressure on the order of a few thousand bar provides insight into the molecular forces responsible for stabilizing the conformations and non-covalent interactions of biological molecules in aqueous solution. In particular, the parameters derived from these studies have enabled researchers to glean information regarding the importance of hydration in the energetics and kinetics of these systems. This review presents data concerned with the application of hydrostatic pressure to study the thermodynamics, kinetics, and structure of nucleic acids and the interactions between nucleic acids and proteins, enzymes, and drugs. These complexes often form extremely stable non-covalent complexes in which electrostatic interactions play an important role. The sensitivity of these interactions to pressure offers a valuable experimental tool for investigating the energetics of the complexes.

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Year:  2002        PMID: 11983401     DOI: 10.1016/s0167-4838(01)00349-1

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  14 in total

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Authors:  Fernanda Bravim; Fernando L Palhano; A Alberto R Fernandes; Patricia M B Fernandes
Journal:  J Ind Microbiol Biotechnol       Date:  2010-06-08       Impact factor: 3.346

2.  Structural and thermodynamic properties of a linearly perturbed matrix model for RNA folding.

Authors:  I Garg; N Deo
Journal:  Eur Phys J E Soft Matter       Date:  2010-11-18       Impact factor: 1.890

3.  Effect of high hydrostatic pressure on hydration and activity of ribozymes.

Authors:  Małgorzata Giel-Pietraszuk; Agnieszka Fedoruk-Wyszomirska; Jan Barciszewski
Journal:  Mol Biol Rep       Date:  2010-03-04       Impact factor: 2.316

4.  The Polyextremophilic Bacterium Clostridium paradoxum Attains Piezophilic Traits by Modulating Its Energy Metabolism and Cell Membrane Composition.

Authors:  Alberto Scoma; Paloma Garrido-Amador; Søren Dollerup Nielsen; Hans Røy; Kasper Urup Kjeldsen
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

5.  Cytochrome P450 from Photobacterium profundum SS9, a piezophilic bacterium, exhibits a tightened control of water access to the active site.

Authors:  Elena V Sineva; Dmitri R Davydov
Journal:  Biochemistry       Date:  2010-11-23       Impact factor: 3.162

6.  Damage in Escherichia coli cells treated with a combination of high hydrostatic pressure and subzero temperature.

Authors:  Marwen Moussa; Jean-Marie Perrier-Cornet; Patrick Gervais
Journal:  Appl Environ Microbiol       Date:  2007-08-31       Impact factor: 4.792

7.  Allosteric mechanisms in cytochrome P450 3A4 studied by high-pressure spectroscopy: pivotal role of substrate-induced changes in the accessibility and degree of hydration of the heme pocket.

Authors:  Dmitri R Davydov; Bradley J Baas; Stephen G Sligar; James R Halpert
Journal:  Biochemistry       Date:  2007-06-08       Impact factor: 3.162

8.  Substrate-specific pressure-dependence of microbial sulfate reduction in deep-sea cold seep sediments of the Japan Trench.

Authors:  Antje Vossmeyer; Christian Deusner; Chiaki Kato; Fumio Inagaki; Timothy G Ferdelman
Journal:  Front Microbiol       Date:  2012-07-17       Impact factor: 5.640

9.  The catalytic mechanism of hairpin ribozyme studied by hydrostatic pressure.

Authors:  Sylvia Tobé; Thomas Heams; Jacques Vergne; Guy Hervé; Marie-Christine Maurel
Journal:  Nucleic Acids Res       Date:  2005-05-03       Impact factor: 16.971

10.  Adaptation of the base-paired double-helix molecular architecture to extreme pressure.

Authors:  Eric Girard; Thierry Prangé; Anne-Claire Dhaussy; Evelyne Migianu-Griffoni; Marc Lecouvey; Jean-Claude Chervin; Mohamed Mezouar; Richard Kahn; Roger Fourme
Journal:  Nucleic Acids Res       Date:  2007-07-07       Impact factor: 16.971

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