Literature DB >> 11983386

Compressibility of protein transitions.

Nicolas Taulier1, Tigran V Chalikian.   

Abstract

We review the results of compressibility studies on proteins and low molecular weight compounds that model the hydration properties of these biopolymers. In particular, we present an analysis of compressibility changes accompanying conformational transitions of globular proteins. This analysis, in conjunction with experimental compressibility data on protein transitions, were used to define the changes in the hydration properties and intrinsic packing associated with native-to-molten globule, native-to-partially unfolded, and native-to-fully unfolded transitions of globular proteins. In addition, we discuss the molecular origins of predominantly positive changes in compressibility observed for pressure-induced denaturation transitions of globular proteins. Throughout this review, we emphasize the importance of compressibility data for characterizing protein transitions, while also describing how such data can be interpreted to gain insight into role that hydration and intrinsic packing play in modulating the stability of and recognition between proteins and other biologically important compounds.

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Year:  2002        PMID: 11983386     DOI: 10.1016/s0167-4838(01)00334-x

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  17 in total

1.  High-pressure EPR reveals conformational equilibria and volumetric properties of spin-labeled proteins.

Authors:  John McCoy; Wayne L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-04       Impact factor: 11.205

2.  Local compressibilities of proteins: comparison of optical experiments and simulations for horse heart cytochrome-c.

Authors:  Christina Scharnagl; Maria Reif; Josef Friedrich
Journal:  Biophys J       Date:  2005-04-15       Impact factor: 4.033

3.  Unfolding and refolding of bovine serum albumin at acid pH: ultrasound and structural studies.

Authors:  N El Kadi; N Taulier; J Y Le Huérou; M Gindre; W Urbach; I Nwigwe; P C Kahn; M Waks
Journal:  Biophys J       Date:  2006-07-21       Impact factor: 4.033

4.  Decomposition of protein experimental compressibility into intrinsic and hydration shell contributions.

Authors:  Voichita M Dadarlat; Carol Beth Post
Journal:  Biophys J       Date:  2006-09-22       Impact factor: 4.033

5.  Kinetic analysis of amyloid protofibril dissociation and volumetric properties of the transition state.

Authors:  Abdul Raziq Abdul Latif; Ryohei Kono; Hideki Tachibana; Kazuyuki Akasaka
Journal:  Biophys J       Date:  2006-09-22       Impact factor: 4.033

6.  Putting the Piezolyte Hypothesis under Pressure.

Authors:  Christina M Papini; Pranav P Pandharipande; Catherine A Royer; George I Makhatadze
Journal:  Biophys J       Date:  2017-08-10       Impact factor: 4.033

7.  Transient conformational fluctuation of TePixD during a reaction.

Authors:  Kunisato Kuroi; Koji Okajima; Masahiko Ikeuchi; Satoru Tokutomi; Masahide Terazima
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-29       Impact factor: 11.205

8.  High-pressure studies of aggregation of recombinant human interleukin-1 receptor antagonist: thermodynamics, kinetics, and application to accelerated formulation studies.

Authors:  Matthew B Seefeldt; Yong-Sung Kim; Kevin P Tolley; Jim Seely; John F Carpenter; Theodore W Randolph
Journal:  Protein Sci       Date:  2005-08-04       Impact factor: 6.725

9.  The energetics of a three-state protein folding system probed by high-pressure relaxation dispersion NMR spectroscopy.

Authors:  Vitali Tugarinov; David S Libich; Virginia Meyer; Julien Roche; G Marius Clore
Journal:  Angew Chem Int Ed Engl       Date:  2015-09-14       Impact factor: 15.336

10.  Structural and thermodynamic characterization of T4 lysozyme mutants and the contribution of internal cavities to pressure denaturation.

Authors:  Nozomi Ando; Buz Barstow; Walter A Baase; Andrew Fields; Brian W Matthews; Sol M Gruner
Journal:  Biochemistry       Date:  2008-09-25       Impact factor: 3.162

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