Literature DB >> 11977808

Selective automated indexing of findings and diagnoses in radiology reports.

W Hersh1, M Mailhot, C Arnott-Smith, H Lowe.   

Abstract

The recent improvements in capabilities of desktop computers and communications networks give impetus for the development of clinical image repositories that can be used for patient care and medical education. A challenge in the use of these systems is the accurate indexing of images for retrieval performance acceptable to users. This paper describes a series of experiments aiming to adapt the SAPHIRE system, which matches text to concepts in the UMLS Metathesaurus, for the automated indexing of image reports. A series of enhancements to the baseline system resulted in a recall of 63% but a precision of only 30% in detecting concepts. At this level of performance, such a system might be problematic for users in a purely automated indexing environment. However, if the ability to retrieve images in repositories based on content in their reports is desired by clinical users, and no other current systems offer this functionality, then follow-up research questions include whether these imperfect results would be useful in a completely or partially automated indexing environment and/or whether other approaches can improve upon them.

Entities:  

Mesh:

Year:  2001        PMID: 11977808     DOI: 10.1006/jbin.2001.1025

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  14 in total

1.  A pilot study of contextual UMLS indexing to improve the precision of concept-based representation in XML-structured clinical radiology reports.

Authors:  Yang Huang; Henry J Lowe; William R Hersh
Journal:  J Am Med Inform Assoc       Date:  2003-08-04       Impact factor: 4.497

2.  Automated encoding of clinical documents based on natural language processing.

Authors:  Carol Friedman; Lyudmila Shagina; Yves Lussier; George Hripcsak
Journal:  J Am Med Inform Assoc       Date:  2004-06-07       Impact factor: 4.497

3.  Automatic identification of critical follow-up recommendation sentences in radiology reports.

Authors:  Meliha Yetisgen-Yildiz; Martin L Gunn; Fei Xia; Thomas H Payne
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

Review 4.  Natural Language Processing Technologies in Radiology Research and Clinical Applications.

Authors:  Tianrun Cai; Andreas A Giannopoulos; Sheng Yu; Tatiana Kelil; Beth Ripley; Kanako K Kumamaru; Frank J Rybicki; Dimitrios Mitsouras
Journal:  Radiographics       Date:  2016 Jan-Feb       Impact factor: 5.333

5.  Improved identification of noun phrases in clinical radiology reports using a high-performance statistical natural language parser augmented with the UMLS specialist lexicon.

Authors:  Yang Huang; Henry J Lowe; Dan Klein; Russell J Cucina
Journal:  J Am Med Inform Assoc       Date:  2005-01-31       Impact factor: 4.497

6.  A novel hybrid approach to automated negation detection in clinical radiology reports.

Authors:  Yang Huang; Henry J Lowe
Journal:  J Am Med Inform Assoc       Date:  2007-02-28       Impact factor: 4.497

7.  Creation and storage of standards-based pre-scanning patient questionnaires in PACS as DICOM objects.

Authors:  Tracy J Robinson; Scott L DuVall; Richard H Wiggins
Journal:  J Digit Imaging       Date:  2011-10       Impact factor: 4.056

8.  Three approaches to automatic assignment of ICD-9-CM codes to radiology reports.

Authors:  Ira Goldstein; Anna Arzrumtsyan; Ozlem Uzuner
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

9.  Voice capture of medical residents' clinical information needs during an inpatient rotation.

Authors:  Herbert S Chase; David R Kaufman; Stephen B Johnson; Eneida A Mendonca
Journal:  J Am Med Inform Assoc       Date:  2009-03-04       Impact factor: 4.497

10.  Automated semantic indexing of figure captions to improve radiology image retrieval.

Authors:  Charles E Kahn; Daniel L Rubin
Journal:  J Am Med Inform Assoc       Date:  2009-03-04       Impact factor: 4.497

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