Literature DB >> 11975346

On the consistency of maximum likelihood estimation of phylogenetic trees from nucleotide sequences.

J S Rogers1.   

Abstract

Mesh:

Year:  1997        PMID: 11975346     DOI: 10.1093/sysbio/46.2.354

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


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  12 in total

1.  Complexity of the simplest phylogenetic estimation problem.

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Journal:  Proc Biol Sci       Date:  2000-01-22       Impact factor: 5.349

2.  Increased taxon sampling is advantageous for phylogenetic inference.

Authors:  David D Pollock; Derrick J Zwickl; Jimmy A McGuire; David M Hillis
Journal:  Syst Biol       Date:  2002-08       Impact factor: 15.683

Review 3.  Genomic biodiversity, phylogenetics and coevolution in proteins.

Authors:  David D Pollock
Journal:  Appl Bioinformatics       Date:  2002

4.  Characteristics of the cultivable bacteria from sediments associated with two deep-sea hydrothermal vents in Okinawa Trough.

Authors:  Qing-lei Sun; Ming-qing Wang; Li Sun
Journal:  World J Microbiol Biotechnol       Date:  2015-09-26       Impact factor: 3.312

5.  The genetic code can cause systematic bias in simple phylogenetic models.

Authors:  Simon Whelan
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-12-27       Impact factor: 6.237

6.  Information geometry for phylogenetic trees.

Authors:  M K Garba; T M W Nye; J Lueg; S F Huckemann
Journal:  J Math Biol       Date:  2021-02-15       Impact factor: 2.259

7.  Assessing parameter identifiability in phylogenetic models using data cloning.

Authors:  José Miguel Ponciano; J Gordon Burleigh; Edward L Braun; Mark L Taper
Journal:  Syst Biol       Date:  2012-05-30       Impact factor: 15.683

8.  CodonPhyML: fast maximum likelihood phylogeny estimation under codon substitution models.

Authors:  Manuel Gil; Marcelo Serrano Zanetti; Stefan Zoller; Maria Anisimova
Journal:  Mol Biol Evol       Date:  2013-02-23       Impact factor: 16.240

9.  Long branch effects distort maximum likelihood phylogenies in simulations despite selection of the correct model.

Authors:  Patrick Kück; Christoph Mayer; Johann-Wolfgang Wägele; Bernhard Misof
Journal:  PLoS One       Date:  2012-05-09       Impact factor: 3.240

10.  Long-branch attraction bias and inconsistency in Bayesian phylogenetics.

Authors:  Bryan Kolaczkowski; Joseph W Thornton
Journal:  PLoS One       Date:  2009-12-09       Impact factor: 3.240

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