Literature DB >> 11975343

A new nuclear gene for insect phylogenetics: dopa decarboxylase is informative of relationships within Heliothinae (Lepidoptera: Noctuidae).

Q Q Fang1, S Cho, J C Regier, C Mitter, M Matthews, R W Poole, T P Friedlander, S Zhao.   

Abstract

The lack of a readily accessible roster of nuclear genes informative at various taxonomic levels is a bottleneck for molecular systematics. In this report, we describe the first phylogenetic application of the sequence that encodes the enzyme dopa decarboxylase (DDC). For 14 test species within the noctuid moth subfamily Heliothinae that represent the previously best-supported groupings, a 690-bp fragment of DDC resolved relationships that are largely concordant with prior evidence from elongation factor-1 alpha (EF-1 alpha), morphology, and allozymes. Although both synonymous and nonsynonymous changes occur in DDC substantially more rapidly than they do in EF-1 alpha, DDC divergences within Heliothinae are below saturation at all codon positions. Analysis of DDC and EF-1 alpha in combination resulted in increased bootstrap support for several groupings. As a first estimate of previously unresolved relationships, DDC sequences were analyzed from 16 additional heliothines, for a total of 30 heliothine species plus outgroups. Previous relationships based on DDC were generally stable with increased taxon sampling, although a two- to eightfold downweighting of codon position 3 was required for complete concordance with the 14-species result. The weighted strict consensus trees were largely resolved and were congruent with most although not all previous hypotheses based on either morphology or EF-1 alpha. The proposed phylogeny suggests that the major agricultural pest heliothines belong to a single clade, characterized by polyphagy and associated life history traits, within this largely host-specific moth subfamily. DDC holds much promise for phylogenetic analysis of Tertiary-age animal groups.

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Year:  1997        PMID: 11975343     DOI: 10.1093/sysbio/46.2.269

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


  15 in total

1.  The use of the nuclear protein-encoding gene, RNA polymerase II, for tick molecular systematics.

Authors:  Quentin Fang; James E Keirans; Tonya Mixson
Journal:  Exp Appl Acarol       Date:  2002       Impact factor: 2.132

Review 2.  Progress, pitfalls and parallel universes: a history of insect phylogenetics.

Authors:  Karl M Kjer; Chris Simon; Margarita Yavorskaya; Rolf G Beutel
Journal:  J R Soc Interface       Date:  2016-08       Impact factor: 4.118

3.  The genetic architecture of ecological adaptation: intraspecific variation in host plant use by the lepidopteran crop pest Chloridea virescens.

Authors:  Sara J Oppenheim; Fred Gould; Keith R Hopper
Journal:  Heredity (Edinb)       Date:  2017-12-14       Impact factor: 3.821

4.  Characterization of the Helicoverpa assulta nucleopolyhedrovirus genome and sequence analysis of the polyhedrin gene region.

Authors:  Soo-Dong Woo; Jae Young Choi; Yeon Ho Je; Byung Rae Jin
Journal:  J Biosci       Date:  2006-09       Impact factor: 1.826

5.  Two single-point mutations shift the ligand selectivity of a pheromone receptor between two closely related moth species.

Authors:  Ke Yang; Ling-Qiao Huang; Chao Ning; Chen-Zhu Wang
Journal:  Elife       Date:  2017-10-24       Impact factor: 8.140

6.  The genetic architecture of a complex ecological trait: host plant use in the specialist moth, Heliothis subflexa.

Authors:  Sara J Oppenheim; Fred Gould; Keith R Hopper
Journal:  Evolution       Date:  2012-07-12       Impact factor: 3.694

7.  Defining a synthetic pheromone blend attractive to male Heliothis subflexa under wind tunnel conditions.

Authors:  Neil J Vickers
Journal:  J Chem Ecol       Date:  2002-06       Impact factor: 2.626

8.  A molecular phylogeny for the leaf-roller moths (Lepidoptera: Tortricidae) and its implications for classification and life history evolution.

Authors:  Jerome C Regier; John W Brown; Charles Mitter; Joaquín Baixeras; Soowon Cho; Michael P Cummings; Andreas Zwick
Journal:  PLoS One       Date:  2012-04-19       Impact factor: 3.240

9.  Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study.

Authors:  Jerome C Regier; Andreas Zwick; Michael P Cummings; Akito Y Kawahara; Soowon Cho; Susan Weller; Amanda Roe; Joaquin Baixeras; John W Brown; Cynthia Parr; Donald R Davis; Marc Epstein; Winifred Hallwachs; Axel Hausmann; Daniel H Janzen; Ian J Kitching; M Alma Solis; Shen-Horn Yen; Adam L Bazinet; Charles Mitter
Journal:  BMC Evol Biol       Date:  2009-12-02       Impact factor: 3.260

10.  Peripheral coding of sex pheromone blends with reverse ratios in two helicoverpa species.

Authors:  Han Wu; Chao Hou; Ling-Qiao Huang; Fu-Shun Yan; Chen-Zhu Wang
Journal:  PLoS One       Date:  2013-07-23       Impact factor: 3.240

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