Literature DB >> 11967262

Functional importance of the 3'-terminal adenosine of tRNA in ribosomal translation.

Kai Virumae1, Urmas Saarma, Jack Horowitz, Jaanus Remme.   

Abstract

The universally conserved 3'-terminal CCA sequence of tRNA interacts with large ribosomal subunit RNA during translation. The functional importance of the interaction between the 3'-terminal nucleotide of tRNA and the ribosome was studied in vitro using mutant in vitro transcribed tRNA(Val) A76G. Val-tRNA(CCG) does not support polypeptide synthesis on poly(GUA) as a message. However, in a co-translation system, where Val-tRNA(CCG) represented only a small fraction of total Val-tRNA, the mutant tRNA is able to transfer valine into a polypeptide chain, albeit at a reduced level. The A76G mutation does not affect binding of Val- or NAcVal-tRNA(CCG) to the A- or P-sites as shown by efficient peptide bond formation, although the donor activity of the mutant NAcVal-tRNA(CCG) in the peptidyl transfer reaction is slightly reduced compared with wild-type NAcVal-tRNA. Translocation of 3'-CCG-tRNA from the P- to the E-site is not significantly influenced. However, the A76G mutation drastically inhibits translocation of peptidyl-tRNA G(76) from the ribosomal A-site to the P-site, which apparently explains its failure to support cell-free protein synthesis. Our results indicate that the identity of the 3'-terminal nucleotide of tRNA is critical for tRNA movement in the ribosome.

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Year:  2002        PMID: 11967262     DOI: 10.1074/jbc.M200393200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  4 in total

Review 1.  After the ribosome structure: how does translocation work?

Authors:  Simpson Joseph
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

Review 2.  Elongation in translation as a dynamic interaction among the ribosome, tRNA, and elongation factors EF-G and EF-Tu.

Authors:  Xabier Agirrezabala; Joachim Frank
Journal:  Q Rev Biophys       Date:  2009-08       Impact factor: 5.318

Review 3.  A structural view on the mechanism of the ribosome-catalyzed peptide bond formation.

Authors:  Miljan Simonović; Thomas A Steitz
Journal:  Biochim Biophys Acta       Date:  2009-07-09

4.  Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome.

Authors:  Xabier Agirrezabala; Jianlin Lei; Julie L Brunelle; Rodrigo F Ortiz-Meoz; Rachel Green; Joachim Frank
Journal:  Mol Cell       Date:  2008-10-24       Impact factor: 17.970

  4 in total

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