Literature DB >> 11964224

Quantitative analysis of actin patch movement in yeast.

A E Carlsson1, A D Shah, D Elking, T S Karpova, J A Cooper.   

Abstract

To investigate the mechanism of cortical actin patch movement in yeast, we implement a method for computer tracking the motion of the patches. Digital images from fluorescence microscope movies of living cells are fed into an image-processing program, which generates two-dimensional patch coordinates in the plane of focus for each movie frame via an algorithm based on detection of rapid intensity variations. The patch coordinates in neighboring frames are connected by a minimum-distance algorithm. The method is used to analyze control cells and cells treated with the actin-depolymerizing agent latrunculin. The motion of the patches in both cases, as analyzed by mean-square patch displacements, is found to be a random walk on average, with a much lower diffusion coefficient for the latrunculin-treated cells. The mean-squared patch travel distances for all of the latrunculin-treated cells are lower than those for all of the control cells. The patches move independently of one another. We develop a quantitative criterion for the presence of directed motion, and show that numerous patches in the control cells display directed motion to a very high degree of certainty. A small number of patches in the latrunculin-treated cells display directed motion.

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Year:  2002        PMID: 11964224      PMCID: PMC1302026          DOI: 10.1016/S0006-3495(02)75579-3

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  23 in total

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Journal:  Biophys J       Date:  1991-10       Impact factor: 4.033

3.  Role of actin polymerization and actin cables in actin-patch movement in Schizosaccharomyces pombe.

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Journal:  Nat Cell Biol       Date:  2001-03       Impact factor: 28.824

4.  An elastic analysis of Listeria monocytogenes propulsion.

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5.  The Sur7p family defines novel cortical domains in Saccharomyces cerevisiae, affects sphingolipid metabolism, and is involved in sporulation.

Authors:  Michael E Young; Tatiana S Karpova; Britta Brügger; Darcy M Moschenross; Georgeann K Wang; Roger Schneiter; Felix T Wieland; John A Cooper
Journal:  Mol Cell Biol       Date:  2002-02       Impact factor: 4.272

6.  The cortical protein Num1p is essential for dynein-dependent interactions of microtubules with the cortex.

Authors:  R A Heil-Chapdelaine; J R Oberle; J A Cooper
Journal:  J Cell Biol       Date:  2000-12-11       Impact factor: 10.539

7.  The COOH-terminal domain of Myo2p, a yeast myosin V, has a direct role in secretory vesicle targeting.

Authors:  D Schott; J Ho; D Pruyne; A Bretscher
Journal:  J Cell Biol       Date:  1999-11-15       Impact factor: 10.539

8.  A role for actin, Cdc1p, and Myo2p in the inheritance of late Golgi elements in Saccharomyces cerevisiae.

Authors:  O W Rossanese; C A Reinke; B J Bevis; A T Hammond; I B Sears; J O'Connor; B S Glick
Journal:  J Cell Biol       Date:  2001-04-02       Impact factor: 10.539

9.  The life cycle of actin patches in mating yeast.

Authors:  M G Smith; S R Swamy; L A Pon
Journal:  J Cell Sci       Date:  2001-04       Impact factor: 5.285

10.  Structural rearrangements of tubulin and actin during the cell cycle of the yeast Saccharomyces.

Authors:  J V Kilmartin; A E Adams
Journal:  J Cell Biol       Date:  1984-03       Impact factor: 10.539

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  22 in total

1.  Diverse protective roles of the actin cytoskeleton during oxidative stress.

Authors:  Michelle E Farah; Vladimir Sirotkin; Brian Haarer; David Kakhniashvili; David C Amberg
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2.  Active transport and cluster formation on 2D networks.

Authors:  P Greulich; L Santen
Journal:  Eur Phys J E Soft Matter       Date:  2010-06-17       Impact factor: 1.890

3.  Budding Yeast Has a Minimal Endomembrane System.

Authors:  Kasey J Day; Jason C Casler; Benjamin S Glick
Journal:  Dev Cell       Date:  2018-01-08       Impact factor: 12.270

4.  Actin-based motility during endocytosis in budding yeast.

Authors:  Kyoungtae Kim; Brian J Galletta; Kevin O Schmidt; Fanny S Chang; Kendall J Blumer; John A Cooper
Journal:  Mol Biol Cell       Date:  2006-01-04       Impact factor: 4.138

5.  Overlapping and distinct functions for cofilin, coronin and Aip1 in actin dynamics in vivo.

Authors:  Meng-Chi Lin; Brian J Galletta; David Sept; John A Cooper
Journal:  J Cell Sci       Date:  2010-03-23       Impact factor: 5.285

Review 6.  Fungal Morphogenesis, from the Polarized Growth of Hyphae to Complex Reproduction and Infection Structures.

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Journal:  Microbiol Mol Biol Rev       Date:  2018-04-11       Impact factor: 11.056

7.  Changes in gravity rapidly alter the magnitude and direction of a cellular calcium current.

Authors:  Mari L Salmi; Aeraj ul Haque; Thomas J Bushart; Stephen C Stout; Stanley J Roux; D Marshall Porterfield
Journal:  Planta       Date:  2011-01-15       Impact factor: 4.116

8.  Actin filament bundling by fimbrin is important for endocytosis, cytokinesis, and polarization in fission yeast.

Authors:  Colleen T Skau; David S Courson; Andrew J Bestul; Jonathan D Winkelman; Ronald S Rock; Vladimir Sirotkin; David R Kovar
Journal:  J Biol Chem       Date:  2011-06-03       Impact factor: 5.157

Review 9.  Cell polarization and cytokinesis in budding yeast.

Authors:  Erfei Bi; Hay-Oak Park
Journal:  Genetics       Date:  2012-06       Impact factor: 4.562

10.  Identification of novel mutations in ACT1 and SLA2 that suppress the actin-cable-overproducing phenotype caused by overexpression of a dominant active form of Bni1p in Saccharomyces cerevisiae.

Authors:  Shiro Yoshiuchi; Takaharu Yamamoto; Hiroshi Sakane; Jun Kadota; Junko Mochida; Masahiro Asaka; Kazuma Tanaka
Journal:  Genetics       Date:  2006-03-17       Impact factor: 4.562

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