Literature DB >> 11943159

Crystal structure of plant pectin methylesterase.

Kenth Johansson1, Mustapha El-Ahmad, Rosmarie Friemann, Hans Jörnvall, Oskar Markovic, Hans Eklund.   

Abstract

Pectin is a principal component in the primary cell wall of plants. During cell development, pectin is modified by pectin methylesterases to give different properties to the cell wall. This report describes the first crystal structure of a plant pectin methylesterase. The beta-helical structure embodies a central cleft, lined by several aromatic residues, that has been deduced to be suitable for pectin binding. The active site is found at the center of this cleft where Asp157 is suggested to act as the nucleophile, Asp136 as an acid/base and Gln113/Gln135 to form an anion hole to stabilize the transition state.

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Year:  2002        PMID: 11943159     DOI: 10.1016/s0014-5793(02)02372-4

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  29 in total

1.  Structure of a pectin methylesterase from Yersinia enterocolitica.

Authors:  Alisdair B Boraston; D Wade Abbott
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-01-21

2.  Rheo-NMR studies of an enzymatic reaction: evidence of a shear-stable macromolecular system.

Authors:  Patrick J B Edwards; Motoko Kakubayashi; Robin Dykstra; Steven M Pascal; Martin A K Williams
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

3.  Structure and functional features of olive pollen pectin methylesterase using homology modeling and molecular docking methods.

Authors:  Jose C Jimenez-Lopez; Simeon O Kotchoni; María I Rodríguez-García; Juan D Alché
Journal:  J Mol Model       Date:  2012-06-22       Impact factor: 1.810

4.  Structural insights into the target specificity of plant invertase and pectin methylesterase inhibitory proteins.

Authors:  Michael Hothorn; Sebastian Wolf; Patrick Aloy; Steffen Greiner; Klaus Scheffzek
Journal:  Plant Cell       Date:  2004-11-04       Impact factor: 11.277

5.  The in situ observation of the temperature and pressure stability of recombinant Aspergillus aculeatus pectin methylesterase with Fourier transform IR spectroscopy reveals an unusual pressure stability of beta-helices.

Authors:  Carolien Dirix; Thomas Duvetter; Ann Van Loey; Marc Hendrickx; Karel Heremans
Journal:  Biochem J       Date:  2005-12-15       Impact factor: 3.857

6.  Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana.

Authors:  Romain Louvet; Emilie Cavel; Laurent Gutierrez; Stéphanie Guénin; David Roger; Françoise Gillet; François Guerineau; Jérôme Pelloux
Journal:  Planta       Date:  2006-04-19       Impact factor: 4.116

7.  PsPMEP, a pollen-specific pectin methylesterase of pea (Pisum sativum L.).

Authors:  María Dolores Gómez; Begoña Renau-Morata; Edelín Roque; Julio Polaina; José Pío Beltrán; Luis A Cañas
Journal:  Plant Reprod       Date:  2013-07-10       Impact factor: 3.767

8.  Isolation and Expression analysis of OsPME1, encoding for a putative Pectin Methyl Esterase from Oryza sativa (subsp. indica).

Authors:  Vydehi Kanneganti; Aditya Kumar Gupta
Journal:  Physiol Mol Biol Plants       Date:  2009-06-28

9.  Substrate dynamics in enzyme action: rotations of monosaccharide subunits in the binding groove are essential for pectin methylesterase processivity.

Authors:  Davide Mercadante; Laurence D Melton; Geoffrey B Jameson; Martin A K Williams; Alfonso De Simone
Journal:  Biophys J       Date:  2013-04-16       Impact factor: 4.033

10.  Structural basis for the interaction between pectin methylesterase and a specific inhibitor protein.

Authors:  Adele Di Matteo; Alfonso Giovane; Alessandro Raiola; Laura Camardella; Daniele Bonivento; Giulia De Lorenzo; Felice Cervone; Daniela Bellincampi; Demetrius Tsernoglou
Journal:  Plant Cell       Date:  2005-02-18       Impact factor: 11.277

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