Literature DB >> 11932007

Near the edge of a chromosome's "black hole".

Steven Henikoff1.   

Abstract

The inability of current technology to determine contiguous sequence for highly repetitive regions means that centromeres fall within multi-megabase gaps, analogous to black holes from which no information escapes. However, high-resolution mapping of a human X-centromere border reveals a remarkable structure, including a gradient of alpha-satellite divergence up to the edge of the youngest and most homogeneous repeats.

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Year:  2002        PMID: 11932007     DOI: 10.1016/s0168-9525(01)02622-1

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  24 in total

1.  Distribution of retroelements in centromeres and neocentromeres of maize.

Authors:  Rebecca J Mroczek; R Kelly Dawe
Journal:  Genetics       Date:  2003-10       Impact factor: 4.562

2.  Large tandem, higher order repeats and regularly dispersed repeat units contribute substantially to divergence between human and chimpanzee Y chromosomes.

Authors:  Vladimir Paar; Matko Glunčić; Ivan Basar; Marija Rosandić; Petar Paar; Mislav Cvitković
Journal:  J Mol Evol       Date:  2010-11-20       Impact factor: 2.395

3.  In-depth sequence analysis of the tomato chromosome 12 centromeric region: identification of a large CAA block and characterization of pericentromere retrotranposons.

Authors:  Tae-Jin Yang; Seunghee Lee; Song-Bin Chang; Yeisoo Yu; Hans de Jong; Rod A Wing
Journal:  Chromosoma       Date:  2005-06-17       Impact factor: 4.316

4.  Precise centromere mapping using a combination of repeat junction markers and chromatin immunoprecipitation-polymerase chain reaction.

Authors:  Amy C Luce; Anupma Sharma; Oliver S B Mollere; Thomas K Wolfgruber; Kiyotaka Nagaki; Jiming Jiang; Gernot G Presting; R Kelly Dawe
Journal:  Genetics       Date:  2006-09-01       Impact factor: 4.562

5.  Molecular cytogenetic evidence of rearrangements on the Y chromosome of the threespine stickleback fish.

Authors:  Joseph A Ross; Catherine L Peichel
Journal:  Genetics       Date:  2008-08-09       Impact factor: 4.562

6.  Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere.

Authors:  Huihuang Yan; Hidetaka Ito; Kan Nobuta; Shu Ouyang; Weiwei Jin; Shulan Tian; Cheng Lu; R C Venu; Guo-Liang Wang; Pamela J Green; Rod A Wing; C Robin Buell; Blake C Meyers; Jiming Jiang
Journal:  Plant Cell       Date:  2006-07-28       Impact factor: 11.277

7.  Centromeric retroelements and satellites interact with maize kinetochore protein CENH3.

Authors:  Cathy Xiaoyan Zhong; Joshua B Marshall; Christopher Topp; Rebecca Mroczek; Akio Kato; Kiyotaka Nagaki; James A Birchler; Jiming Jiang; R Kelly Dawe
Journal:  Plant Cell       Date:  2002-11       Impact factor: 11.277

8.  Molecular and functional dissection of the maize B chromosome centromere.

Authors:  Weiwei Jin; Jonathan C Lamb; Juan M Vega; R Kelly Dawe; James A Birchler; Jiming Jiang
Journal:  Plant Cell       Date:  2005-04-01       Impact factor: 11.277

9.  Identification of the centromeric repeat in the threespine stickleback fish (Gasterosteus aculeatus).

Authors:  Jennifer N Cech; Catherine L Peichel
Journal:  Chromosome Res       Date:  2015-09-30       Impact factor: 5.239

10.  Divergence in centromere structure distinguishes related genomes in Coix lacryma-jobi and its wild relative.

Authors:  Yonghua Han; Guixiang Wang; Zhao Liu; Jinhua Liu; Wei Yue; Rentao Song; Xueyong Zhang; Weiwei Jin
Journal:  Chromosoma       Date:  2009-09-08       Impact factor: 4.316

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