Literature DB >> 11929218

Hydrogen-bond-mediated tuning of the redox potential of the non-heme Fe site of superoxide dismutase.

Emine Yikilmaz1, Juan Xie, Thomas C Brunold, Anne-Frances Miller.   

Abstract

The highly homologous proteins of Fe-containing superoxide dismutase (FeSOD) and MnSOD from Escherichia coli nonetheless exert very different redox tuning on the active site metal ion [Vance; Miller J. Am. Chem. Soc. 1998, 120, 461-467; Biochemistry 2001, 40, 13079-13087]. This was proposed to stem from different hydrogen bonding between the protein and the metal ion's coordinated solvent molecule, and the tight coupling between the protonation state of coordinated solvent and the oxidation state of the metal ion. We now present density functional theory (DFT) calculations on Fe2+ and Fe3+ bound to models of both FeSOD and MnSOD. The calculations support a very important role for the conserved second sphere Gln in MnSOD in specifically destabilizing coordinated H2O relative to coordinated OH-, and thus disfavouring the oxidized state of the metal ion. To test these results we have mutated this Gln to Glu, which is isosteric and isoelectronic to Gln but functions as an H-bond acceptor instead of an H-bond donor and thus should increase the stability of Fe2+-bound H2O. In accordance with the calculations, Q69E-FeSOD displays a significantly higher reduction potential than wild-type FeSOD. Thus we have demonstrated that hydrogen bonds to coordinated solvent can exert strong redox tuning on a metal ion.

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Year:  2002        PMID: 11929218     DOI: 10.1021/ja011220v

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

Review 1.  Superoxide dismutases: ancient enzymes and new insights.

Authors:  Anne-Frances Miller
Journal:  FEBS Lett       Date:  2011-11-10       Impact factor: 4.124

2.  Comparison of two yeast MnSODs: mitochondrial Saccharomyces cerevisiae versus cytosolic Candida albicans.

Authors:  Yuewei Sheng; Troy A Stich; Kevin Barnese; Edith B Gralla; Duilio Cascio; R David Britt; Diane E Cabelli; Joan Selverstone Valentine
Journal:  J Am Chem Soc       Date:  2011-11-30       Impact factor: 15.419

3.  Structure, redox, pKa, spin. A golden tetrad for understanding metalloenzyme energetics and reaction pathways.

Authors:  Louis Noodleman; Wen-Ge Han
Journal:  J Biol Inorg Chem       Date:  2006-07-08       Impact factor: 3.358

4.  Stabilization of protein structure through π-π interaction in the second coordination sphere of pseudoazurin.

Authors:  Takahide Yamaguchi; Yuko Nihei; Duncan E K Sutherland; Martin J Stillman; Takamitsu Kohzuma
Journal:  Protein Sci       Date:  2017-07-20       Impact factor: 6.725

Review 5.  Superoxide dismutases and superoxide reductases.

Authors:  Yuewei Sheng; Isabel A Abreu; Diane E Cabelli; Michael J Maroney; Anne-Frances Miller; Miguel Teixeira; Joan Selverstone Valentine
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

6.  Design of Heteronuclear Metalloenzymes.

Authors:  A Bhagi-Damodaran; P Hosseinzadeh; E Mirts; J Reed; I D Petrik; Y Lu
Journal:  Methods Enzymol       Date:  2016-07-26       Impact factor: 1.600

7.  The crystal structure of an eukaryotic iron superoxide dismutase suggests intersubunit cooperation during catalysis.

Authors:  Inés G Muñoz; Jose F Moran; Manuel Becana; Guillermo Montoya
Journal:  Protein Sci       Date:  2005-02       Impact factor: 6.725

8.  A Single Outer-Sphere Mutation Stabilizes apo-Mn Superoxide Dismutase by 35 °C and Disfavors Mn Binding.

Authors:  Anne-Frances Miller; Ting Wang
Journal:  Biochemistry       Date:  2017-07-13       Impact factor: 3.162

9.  15N-NMR characterization of His residues in and around the active site of FeSOD.

Authors:  Anne-Frances Miller; Emine Yikilmaz; Surekha Vathyam
Journal:  Biochim Biophys Acta       Date:  2009-11-18

Review 10.  SOD therapeutics: latest insights into their structure-activity relationships and impact on the cellular redox-based signaling pathways.

Authors:  Ines Batinic-Haberle; Artak Tovmasyan; Emily R H Roberts; Zeljko Vujaskovic; Kam W Leong; Ivan Spasojevic
Journal:  Antioxid Redox Signal       Date:  2013-10-01       Impact factor: 8.401

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