Literature DB >> 11917028

Post-transcriptional suppression of gene expression in Xenopus embryos by small interfering RNA.

Yuan Zhou1, Yick-Pang Ching, Kin Hang Kok, Hsiang-fu Kung, Dong-Yan Jin.   

Abstract

Double-stranded RNA (dsRNA) induces gene-specific silencing in organisms from fungi to animals, a phenomenon known as RNA interference (RNAi). RNAi represents an evolutionarily conserved system to protect against aberrant expression of genes and a powerful tool for gene manipulation. Despite reports that RNAi can be induced in vertebrates, severe sequence-non-specific effects of long dsRNA have been documented in various systems. It has recently been shown in cultured mammalian cells that small interfering RNAs (siRNAs) of 21-23 nt can mediate RNAi but bypass the non-specific response induced by longer dsRNAs. However, the effectiveness of siRNAs has not been demonstrated in living vertebrates. In addition, the mechanism of siRNA suppression of gene expression in vertebrate cells remains to be elucidated. Here we show that synthetic 21 nt siRNAs can specifically inhibit the expression of exogenously introduced as well as endogenous genes in the embryos of Xenopus laevis. siRNAs significantly reduced the steady-state amount of both the mRNA and protein of the cognate gene target. Moreover, co-injection of siRNA with the target RNA transcript specifically suppressed the activity of the latter. Taken together, our findings establish siRNA-mediated post-transcriptional suppression of gene expression in Xenopus embryos.

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Year:  2002        PMID: 11917028      PMCID: PMC101847          DOI: 10.1093/nar/30.7.1664

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  43 in total

1.  Double-stranded RNA induces specific developmental defects in zebrafish embryos.

Authors:  A Wargelius; S Ellingsen; A Fjose
Journal:  Biochem Biophys Res Commun       Date:  1999-09-16       Impact factor: 3.575

2.  An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells.

Authors:  S M Hammond; E Bernstein; D Beach; G J Hannon
Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

3.  Targeted mRNA degradation by double-stranded RNA in vitro.

Authors:  T Tuschl; P D Zamore; R Lehmann; D P Bartel; P A Sharp
Journal:  Genes Dev       Date:  1999-12-15       Impact factor: 11.361

4.  Evidence that processed small dsRNAs may mediate sequence-specific mRNA degradation during RNAi in Drosophila embryos.

Authors:  D Yang; H Lu; J W Erickson
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

5.  Functional anatomy of a dsRNA trigger: differential requirement for the two trigger strands in RNA interference.

Authors:  S Parrish; J Fleenor; S Xu; C Mello; A Fire
Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

6.  Specific double-stranded RNA interference in undifferentiated mouse embryonic stem cells.

Authors:  S Yang; S Tutton; E Pierce; K Yoon
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

7.  Cloning, sequencing, and expression of two murine 2'-5'-oligoadenylate synthetases. Structure-function relationships.

Authors:  S K Ghosh; J Kusari; S K Bandyopadhyay; H Samanta; R Kumar; G C Sen
Journal:  J Biol Chem       Date:  1991-08-15       Impact factor: 5.157

8.  Rescue of polyglutamine-mediated cytotoxicity by double-stranded RNA-mediated RNA interference.

Authors:  Natasha J Caplen; J Paul Taylor; Victoria S Statham; Fumiaki Tanaka; Andrew Fire; Richard A Morgan
Journal:  Hum Mol Genet       Date:  2002-01-15       Impact factor: 6.150

9.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

10.  Too much interference: injection of double-stranded RNA has nonspecific effects in the zebrafish embryo.

Authors:  A C Oates; A E Bruce; R K Ho
Journal:  Dev Biol       Date:  2000-08-01       Impact factor: 3.582

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  9 in total

1.  A simple and cost-effective method for producing small interfering RNAs with high efficacy.

Authors:  Muhammad Sohail; Graeme Doran; Johann Riedemann; Val Macaulay; Edwin M Southern
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

Review 2.  Subcellular fate and off-target effects of siRNA, shRNA, and miRNA.

Authors:  Saurabh Singh; Ajit S Narang; Ram I Mahato
Journal:  Pharm Res       Date:  2011-10-28       Impact factor: 4.200

Review 3.  In vivo RNAi: today and tomorrow.

Authors:  Norbert Perrimon; Jian-Quan Ni; Lizabeth Perkins
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-09       Impact factor: 10.005

4.  RNA interference of the salivary gland nitrophorin 2 in the triatomine bug Rhodnius prolixus (Hemiptera: Reduviidae) by dsRNA ingestion or injection.

Authors:  R N Araujo; A Santos; F S Pinto; N F Gontijo; M J Lehane; M H Pereira
Journal:  Insect Biochem Mol Biol       Date:  2006-06-13       Impact factor: 4.714

Review 5.  Xenopus: An emerging model for studying congenital heart disease.

Authors:  Erin Kaltenbrun; Panna Tandon; Nirav M Amin; Lauren Waldron; Chris Showell; Frank L Conlon
Journal:  Birth Defects Res A Clin Mol Teratol       Date:  2011-04-28

6.  RNA Interference (RNAi) Screening in Cultured Drosophila Cells.

Authors:  Juan-Carlos A Padilla; Ashley Chin; Dhara Patel; Xiaofeng Wang; Philippe Jolivet; Eric Lécuyer
Journal:  Methods Mol Biol       Date:  2021

7.  Direct interaction with nup153 mediates binding of Tpr to the periphery of the nuclear pore complex.

Authors:  Manuela E Hase; Volker C Cordes
Journal:  Mol Biol Cell       Date:  2003-05       Impact factor: 4.138

8.  RNA interference by mixtures of siRNAs prepared using custom oligonucleotide arrays.

Authors:  Andrew V Oleinikov; Jun Zhao; Matthew D Gray
Journal:  Nucleic Acids Res       Date:  2005-06-07       Impact factor: 16.971

9.  Xenopus NM23-X4 regulates retinal gliogenesis through interaction with p27Xic1.

Authors:  Toshiaki Mochizuki; Aikaterini Bilitou; Caroline T Waters; Kamran Hussain; Massimo Zollo; Shin-ichi Ohnuma
Journal:  Neural Dev       Date:  2009-01-05       Impact factor: 3.842

  9 in total

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