Literature DB >> 11909505

Confinement-induced entropic recoil of single DNA molecules in a nanofluidic structure.

S W P Turner1, M Cabodi, H G Craighead.   

Abstract

The behavior of DNA molecules is observed in a nanofluidic device near the interface of two regions that produce different configuration entropies. An electric field is applied to drive the molecules partway across the interface. Upon removal of the field, the molecules recoil to the higher-entropy region with a profile characteristic of a force localized to the interface and independent of length. This is consistent with a confinement-mediated entropic force, distinct from the well-known entropic elasticity common to all polymers. An estimate of the hydrodynamic drag is used to produce a lower bound for the force. The phenomenon can be exploited to separate long-strand polyelectrolytes according to length.

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Year:  2002        PMID: 11909505     DOI: 10.1103/PhysRevLett.88.128103

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  28 in total

1.  Presentation of large DNA molecules for analysis as nanoconfined dumbbells.

Authors:  Kristy L Kounovsky-Shafer; Juan P Hernández-Ortiz; Kyubong Jo; Theo Odijk; Juan J de Pablo; David C Schwartz
Journal:  Macromolecules       Date:  2013-10-22       Impact factor: 5.985

2.  Single-file electrophoretic transport and counting of individual DNA molecules in surfactant nanotubes.

Authors:  Michal Tokarz; Björn Akerman; Jessica Olofsson; Jean-Francois Joanny; Paul Dommersnes; Owe Orwar
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-16       Impact factor: 11.205

3.  Optimization of dielectrophoretic DNA stretching in microfabricated devices.

Authors:  Kyung Eun Sung; Mark A Burns
Journal:  Anal Chem       Date:  2006-05-01       Impact factor: 6.986

4.  Molecular sieving in periodic free-energy landscapes created by patterned nanofilter arrays.

Authors:  Jianping Fu; Juhwan Yoo; Jongyoon Han
Journal:  Phys Rev Lett       Date:  2006-07-07       Impact factor: 9.161

5.  Conformational analysis of single DNA molecules undergoing entropically induced motion in nanochannels.

Authors:  J T Mannion; C H Reccius; J D Cross; H G Craighead
Journal:  Biophys J       Date:  2006-06-15       Impact factor: 4.033

Review 6.  Molecular sieving using nanofilters: past, present and future.

Authors:  Jongyoon Han; Jianping Fu; Reto B Schoch
Journal:  Lab Chip       Date:  2007-11-26       Impact factor: 6.799

7.  Conformation, length, and speed measurements of electrodynamically stretched DNA in nanochannels.

Authors:  Christian H Reccius; Samuel M Stavis; John T Mannion; Larry P Walker; H G Craighead
Journal:  Biophys J       Date:  2008-03-13       Impact factor: 4.033

8.  Exact steady-state velocity of ratchets driven by random sequential adsorption.

Authors:  Maria R D'Orsogna; Tom Chou; Tibor Antal
Journal:  J Phys A Math Gen       Date:  2007-05-25

9.  Chain Conformations at the Surface of a Polydisperse Amphiphilic Comb Copolymer Film.

Authors:  William A Kuhlman; Elsa A Olivetti; Linda G Griffith; Anne M Mayes
Journal:  Macromolecules       Date:  2006-07-25       Impact factor: 5.985

10.  A nanosensor for transmembrane capture and identification of single nucleic Acid molecules.

Authors:  Jonathan Nakane; Matthew Wiggin; Andre Marziali
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

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