Literature DB >> 11894989

A cellular oscillator model for periodic pattern formation.

J Jaeger1, B C Goodwin.   

Abstract

In this paper, we present a model for pattern formation in developing organisms that is based on cellular oscillators (CO). An oscillatory process within cells serves as a developmental clock whose period is tightly regulated by cell autonomous or non-autonomous mechanisms. A spatial pattern is generated as a result of an initial temporal ordering of the cell oscillators freezing into spatial order as the clocks slow down and stop at different times or phases in their cycles. We apply a CO model to vertebrate somitogenesis and show that we can reproduce the dynamics of periodic gene expression patterns observed in the pre-somitic mesoderm. We also show how varying somite lengths can be generated with the CO model. We then discuss the model in view of experimental evidence and its relevance to other instances of biological pattern formation, showing its versatility as a pattern generator.

Mesh:

Year:  2001        PMID: 11894989     DOI: 10.1006/jtbi.2001.2414

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  12 in total

Review 1.  From segment to somite: segmentation to epithelialization analyzed within quantitative frameworks.

Authors:  Paul M Kulesa; Santiago Schnell; Stefan Rudloff; Ruth E Baker; Philip K Maini
Journal:  Dev Dyn       Date:  2007-06       Impact factor: 3.780

2.  Delayed coupling theory of vertebrate segmentation.

Authors:  Luis G Morelli; Saúl Ares; Leah Herrgen; Christian Schröter; Frank Jülicher; Andrew C Oates
Journal:  HFSP J       Date:  2008-12-10

Review 3.  Quantitative approaches in developmental biology.

Authors:  Andrew C Oates; Nicole Gorfinkiel; Marcos González-Gaitán; Carl-Philipp Heisenberg
Journal:  Nat Rev Genet       Date:  2009-08       Impact factor: 53.242

Review 4.  Signalling dynamics in vertebrate segmentation.

Authors:  Alexis Hubaud; Olivier Pourquié
Journal:  Nat Rev Mol Cell Biol       Date:  2014-11       Impact factor: 94.444

5.  Growth patterns in Onychophora (velvet worms): lack of a localised posterior proliferation zone.

Authors:  Georg Mayer; Chiharu Kato; Björn Quast; Rebecca H Chisholm; Kerry A Landman; Leonie M Quinn
Journal:  BMC Evol Biol       Date:  2010-11-04       Impact factor: 3.260

6.  A spatio-temporal model of Notch signalling in the zebrafish segmentation clock: conditions for synchronised oscillatory dynamics.

Authors:  Alan J Terry; Marc Sturrock; J Kim Dale; Miguel Maroto; Mark A J Chaplain
Journal:  PLoS One       Date:  2011-02-28       Impact factor: 3.240

7.  Tight coupling of metabolic oscillations and intracellular water dynamics in Saccharomyces cerevisiae.

Authors:  Henrik Seir Thoke; Asger Tobiesen; Jonathan Brewer; Per Lyngs Hansen; Roberto P Stock; Lars F Olsen; Luis A Bagatolli
Journal:  PLoS One       Date:  2015-02-23       Impact factor: 3.240

8.  Time-lapse observation of stepwise regression of Erk activity in zebrafish presomitic mesoderm.

Authors:  Dini Wahyu Kartika Sari; Ryutaro Akiyama; Honda Naoki; Hannosuke Ishijima; Yasumasa Bessho; Takaaki Matsui
Journal:  Sci Rep       Date:  2018-03-12       Impact factor: 4.379

9.  Practical lessons from theoretical models about the somitogenesis.

Authors:  Aitor González; Ryoichiro Kageyama
Journal:  Gene Regul Syst Bio       Date:  2007-05-28

Review 10.  Rhythmicity and waves in the cortex of single cells.

Authors:  Yang Yang; Min Wu
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

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