Literature DB >> 11893492

Breaking through to the other side: silencers and barriers.

Namrita Dhillon1, Rohinton T Kamakaka.   

Abstract

The establishment and restriction of transcriptionally inactive regions in the nucleus is mediated by silencer and barrier elements. Silencer-bound proteins recruit additional factors to establish the silenced domain during the S-phase of the cell cycle but, contrary to previous models, DNA replication is not a pre-requisite for the establishment. Characteristically, silenced domains contain hypoacetylated histones and recent data have identified residue-specific methylation of histone H3 as an additional signature that distinguishes active regions from inactive ones. Peaks of acetylated histones demarcate the boundaries between these regions and recruitment of HAT activities provides a mechanism to restrict the spread of heterochromatin.

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Substances:

Year:  2002        PMID: 11893492     DOI: 10.1016/s0959-437x(02)00285-x

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  9 in total

1.  The vertebrate protein CTCF functions as an insulator in Saccharomyces cerevisiae.

Authors:  Pierre-Antoine Defossez; Eric Gilson
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

2.  Dual roles for Mcm10 in DNA replication initiation and silencing at the mating-type loci.

Authors:  Nancy L Douglas; Samantha K Dozier; Justin J Donato
Journal:  Mol Biol Rep       Date:  2005-12       Impact factor: 2.316

3.  Transcription independent insulation at TFIIIC-dependent insulators.

Authors:  Lourdes Valenzuela; Namrita Dhillon; Rohinton T Kamakaka
Journal:  Genetics       Date:  2009-07-13       Impact factor: 4.562

4.  Histone H1 of Saccharomyces cerevisiae inhibits transcriptional silencing.

Authors:  Marie Veron; Yanfei Zou; Qun Yu; Xin Bi; Abdelkader Selmi; Eric Gilson; Pierre-Antoine Defossez
Journal:  Genetics       Date:  2006-04-02       Impact factor: 4.562

Review 5.  TFIIIC bound DNA elements in nuclear organization and insulation.

Authors:  Jacob G Kirkland; Jesse R Raab; Rohinton T Kamakaka
Journal:  Biochim Biophys Acta       Date:  2012-09-21

6.  Distinct HP1 and Su(var)3-9 complexes bind to sets of developmentally coexpressed genes depending on chromosomal location.

Authors:  Frauke Greil; Ineke van der Kraan; Jeffrey Delrow; James F Smothers; Elzo de Wit; Harmen J Bussemaker; Roel van Driel; Steven Henikoff; Bas van Steensel
Journal:  Genes Dev       Date:  2003-11-15       Impact factor: 11.361

Review 7.  Epigenetic aberrations and cancer.

Authors:  Miryam Ducasse; Mark A Brown
Journal:  Mol Cancer       Date:  2006-11-08       Impact factor: 27.401

8.  Proteomic and genomic characterization of chromatin complexes at a boundary.

Authors:  Alan J Tackett; David J Dilworth; Megan J Davey; Michael O'Donnell; John D Aitchison; Michael P Rout; Brian T Chait
Journal:  J Cell Biol       Date:  2005-04-11       Impact factor: 10.539

9.  The role of multiple marks in epigenetic silencing and the emergence of a stable bivalent chromatin state.

Authors:  Swagatam Mukhopadhyay; Anirvan M Sengupta
Journal:  PLoS Comput Biol       Date:  2013-07-18       Impact factor: 4.475

  9 in total

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