Literature DB >> 11880439

Rapid detection of herpes simplex virus DNA in genital ulcers by real-time PCR using SYBR green I dye as the detection signal.

Carmen Aldea1, Carmen P Alvarez, Lola Folgueira, Rafael Delgado, Joaquín R Otero.   

Abstract

We have evaluated a real-time PCR procedure based on the LightCycler technology for rapid detection of herpes simplex virus (HSV) in genital lesions. Two sets of primers, corresponding to the thymidine kinase and DNA polymerase regions, were used for the amplification reactions in separate capillaries containing the SYBR Green I dye as detection signal. In 28 of 118 samples (24%), HSV was isolated by conventional cell culture. All cell culture-positive samples were also positive by real-time PCR. Six additional cell culture-negative samples were positive by PCR with both sets of primers. Total processing time was less than 3 h. Real-time PCR using SYBR Green I as detection signal is a sensitive procedure for the rapid diagnosis of HSV in genital lesions.

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Year:  2002        PMID: 11880439      PMCID: PMC120289          DOI: 10.1128/JCM.40.3.1060-1062.2002

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  14 in total

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Authors:  Y W Tang; P S Mitchell; M J Espy; T F Smith; D H Persing
Journal:  J Clin Microbiol       Date:  1999-07       Impact factor: 5.948

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Authors:  G Schalasta; A Arents; M Schmid; R W Braun; G Enders
Journal:  Infection       Date:  2000 Mar-Apr       Impact factor: 3.553

3.  Evaluation of LightCycler PCR for implementation of laboratory diagnosis of herpes simplex virus infections.

Authors:  M J Espy; T K Ross; R Teo; K A Svien; A D Wold; J R Uhl; T F Smith
Journal:  J Clin Microbiol       Date:  2000-08       Impact factor: 5.948

4.  LightCycler multiplex PCR for the laboratory diagnosis of common viral infections of the central nervous system.

Authors:  S J Read; J L Mitchell; C G Fink
Journal:  J Clin Microbiol       Date:  2001-09       Impact factor: 5.948

5.  Analysis of human cytomegalovirus DNA in urines of newborns and infants by means of a new ultrarapid real-time PCR-system.

Authors:  G Schalasta; M Eggers; M Schmid; G Enders
Journal:  J Clin Virol       Date:  2000-12       Impact factor: 3.168

6.  Diagnosis of herpes simplex virus infections in the clinical laboratory by LightCycler PCR.

Authors:  M J Espy; J R Uhl; P S Mitchell; J N Thorvilson; K A Svien; A D Wold; T F Smith
Journal:  J Clin Microbiol       Date:  2000-02       Impact factor: 5.948

7.  Non-invasive diagnosis of herpes simplex encephalitis.

Authors:  K F Powell; N E Anderson; R W Frith; M C Croxson
Journal:  Lancet       Date:  1990-02-10       Impact factor: 79.321

8.  Comparison of enzyme immunoassay, shell vial culture, and conventional cell culture for the rapid detection of herpes simplex virus.

Authors:  S L Johnston; C S Siegel
Journal:  Diagn Microbiol Infect Dis       Date:  1990 May-Jun       Impact factor: 2.803

9.  SYBR green I DNA staining increases the detection sensitivity of viruses by polymerase chain reaction.

Authors:  F Karlsen; H B Steen; J M Nesland
Journal:  J Virol Methods       Date:  1995-09       Impact factor: 2.014

Review 10.  New developments in the diagnosis of viral diseases.

Authors:  T F Smith; A D Wold; M J Espy; W F Marshall
Journal:  Infect Dis Clin North Am       Date:  1993-06       Impact factor: 5.982

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  20 in total

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Journal:  Cell Mol Neurobiol       Date:  2005-09       Impact factor: 5.046

2.  Genital herpes.

Authors:  A M Geretti
Journal:  Sex Transm Infect       Date:  2006-12       Impact factor: 3.519

Review 3.  Real-time PCR in clinical microbiology: applications for routine laboratory testing.

Authors:  M J Espy; J R Uhl; L M Sloan; S P Buckwalter; M F Jones; E A Vetter; J D C Yao; N L Wengenack; J E Rosenblatt; F R Cockerill; T F Smith
Journal:  Clin Microbiol Rev       Date:  2006-01       Impact factor: 26.132

4.  Visualization of DNA-containing structures in various species of Chlorophyta, Rhodophyta and Cyanophyta using SYBR Green I dye.

Authors:  M Vítová; J Hendrychová; V Cepák; V Zachleder
Journal:  Folia Microbiol (Praha)       Date:  2005       Impact factor: 2.099

5.  Real-Time PCR: Revolutionizing Detection and Expression Analysis of Genes.

Authors:  Sa Deepak; Kr Kottapalli; R Rakwal; G Oros; Ks Rangappa; H Iwahashi; Y Masuo; Gk Agrawal
Journal:  Curr Genomics       Date:  2007-06       Impact factor: 2.236

6.  National survey of diagnostic services for genital herpes.

Authors:  A M Geretti; D W Brown
Journal:  Sex Transm Infect       Date:  2005-08       Impact factor: 3.519

7.  The workflow from post-mortem human brain sampling to cell microdissection: a Brain Net Europe study.

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Journal:  J Neural Transm (Vienna)       Date:  2015-05-16       Impact factor: 3.575

8.  Comparison of specimen processing and nucleic acid extraction by the swab extraction tube system versus the MagNA Pure LC system for laboratory diagnosis of herpes simplex virus infections by LightCycler PCR.

Authors:  N C Issa; M J Espy; J R Uhl; W S Harmsen; J N Mandrekar; R E Gullerud; M D Davis; T F Smith
Journal:  J Clin Microbiol       Date:  2005-03       Impact factor: 5.948

9.  Diagnosing herpesvirus infections by real-time amplification and rapid culture.

Authors:  G J J van Doornum; J Guldemeester; A D M E Osterhaus; H G M Niesters
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

10.  Differential expression of oxidative phosphorylation genes in patients with Alzheimer's disease: implications for early mitochondrial dysfunction and oxidative damage.

Authors:  Maria Manczak; Byung S Park; Youngsin Jung; P Hemachandra Reddy
Journal:  Neuromolecular Med       Date:  2004       Impact factor: 3.843

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