Literature DB >> 11876476

Finding your knockout: reverse genetics techniques for plants.

Sean T May1, Deborah Clements, Malcolm J Bennett.   

Abstract

The process of finding a mutant plant for your gene of interest has recently become far more straightforward and painless than has ever been possible before. This has come about through the production of large-scale insertional mutagenesis populations. These can now be readily screened in bulk for insertional mutants through a mixture of molecular (PCR/hybridization) and bioinformation techniques. Here we describe a step-by-step guide to the molecular protocols and a description of the bioinformatics approach.

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Year:  2002        PMID: 11876476     DOI: 10.1385/MB:20:2:209

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  18 in total

1.  Analysis of flanking sequences from dissociation insertion lines: a database for reverse genetics in Arabidopsis.

Authors:  S Parinov; M Sevugan; D Ye; W C Yang; M Kumaran; V Sundaresan
Journal:  Plant Cell       Date:  1999-12       Impact factor: 11.277

Review 2.  Chemical-inducible systems for regulated expression of plant genes.

Authors:  J Zuo; N H Chua
Journal:  Curr Opin Biotechnol       Date:  2000-04       Impact factor: 9.740

3.  Gene targeting by homologous recombination in Drosophila.

Authors:  Y S Rong; K G Golic
Journal:  Science       Date:  2000-06-16       Impact factor: 47.728

4.  Efficient gene targeting in the moss Physcomitrella patens.

Authors:  D G Schaefer; J P Zrÿd
Journal:  Plant J       Date:  1997-06       Impact factor: 6.417

5.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

6.  The effect of temperature and oligonucleotide primer length on the specificity and efficiency of amplification by the polymerase chain reaction.

Authors:  D Y Wu; L Ugozzoli; B K Pal; J Qian; R B Wallace
Journal:  DNA Cell Biol       Date:  1991-04       Impact factor: 3.311

7.  U-richness is a defining feature of plant introns and may function as an intron recognition signal in maize.

Authors:  C H Ko; V Brendel; R D Taylor; V Walbot
Journal:  Plant Mol Biol       Date:  1998-03       Impact factor: 4.076

8.  dbEST--database for "expressed sequence tags".

Authors:  M S Boguski; T M Lowe; C M Tolstoshev
Journal:  Nat Genet       Date:  1993-08       Impact factor: 38.330

9.  Identification of transferred DNA insertions within Arabidopsis genes involved in signal transduction and ion transport.

Authors:  P J Krysan; J C Young; F Tax; M R Sussman
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

10.  Sequence-based identification of T-DNA insertion mutations in Arabidopsis: actin mutants act2-1 and act4-1.

Authors:  E C McKinney; N Ali; A Traut; K A Feldmann; D A Belostotsky; J M McDowell; R B Meagher
Journal:  Plant J       Date:  1995-10       Impact factor: 6.417

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