Literature DB >> 11861553

RNA interference in the pathogenic fungus Cryptococcus neoformans.

Hong Liu1, Tricia R Cottrell, Lynda M Pierini, William E Goldman, Tamara L Doering.   

Abstract

Cryptococcus neoformans is a pathogenic fungus responsible for serious disease in immunocompromised individuals. This organism has recently been developed as an experimental system, with initiation of a genome project among other molecular advances. However, investigations of Cryptococcus are hampered by the technical difficulty of specific gene replacements. RNA interference, a process in which the presence of double-stranded RNA homologous to a gene of interest results in specific degradation of the corresponding message, may help solve this problem. We have shown that expression of double-stranded RNA corresponding to portions of the cryptococcal CAP59 and ADE2 genes results in reduced mRNA levels for those genes, with phenotypic consequences similar to that of gene disruption. The two genes could also be subjected to simultaneous interference through expression of chimeric double-stranded RNA. Specific modulation of protein expression through introduction of double-stranded RNA thus operates in C. neoformans, which is the first demonstration of this technique in a fungal organism. Use of RNA interference in Cryptococcus should allow manipulation of mRNA levels for functional analysis of genes of interest and enable efficient exploration of genes discovered by genome sequencing.

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Year:  2002        PMID: 11861553      PMCID: PMC1461992     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  28 in total

1.  Specific interference with gene function by double-stranded RNA in early mouse development.

Authors:  F Wianny; M Zernicka-Goetz
Journal:  Nat Cell Biol       Date:  2000-02       Impact factor: 28.824

2.  Gene silencing in worms and fungi.

Authors:  C Catalanotto; G Azzalin; G Macino; C Cogoni
Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

Review 3.  Double-stranded RNA as a template for gene silencing.

Authors:  B L Bass
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

4.  The rde-1 gene, RNA interference, and transposon silencing in C. elegans.

Authors:  H Tabara; M Sarkissian; W G Kelly; J Fleenor; A Grishok; L Timmons; A Fire; C C Mello
Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

Review 5.  PKR; a sentinel kinase for cellular stress.

Authors:  B R Williams
Journal:  Oncogene       Date:  1999-11-01       Impact factor: 9.867

6.  Specific interference by ingested dsRNA.

Authors:  L Timmons; A Fire
Journal:  Nature       Date:  1998-10-29       Impact factor: 49.962

7.  RNAi in C. elegans: soaking in the genome sequence.

Authors:  H Tabara; A Grishok; C C Mello
Journal:  Science       Date:  1998-10-16       Impact factor: 47.728

Review 8.  RNAi and double-strand RNA.

Authors:  P A Sharp
Journal:  Genes Dev       Date:  1999-01-15       Impact factor: 11.361

Review 9.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

10.  The Cryptococcus neoformans STE12alpha gene: a putative Saccharomyces cerevisiae STE12 homologue that is mating type specific.

Authors:  B L Wickes; U Edman; J C Edman
Journal:  Mol Microbiol       Date:  1997-12       Impact factor: 3.501

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  53 in total

Review 1.  Molecular genetic and genomic approaches to the study of medically important fungi.

Authors:  P T Magee; Cheryl Gale; Judith Berman; Dana Davis
Journal:  Infect Immun       Date:  2003-05       Impact factor: 3.441

Review 2.  Milestones in Candida albicans gene manipulation.

Authors:  Dhanushki P Samaranayake; Steven D Hanes
Journal:  Fungal Genet Biol       Date:  2011-04-14       Impact factor: 3.495

Review 3.  A yeast under cover: the capsule of Cryptococcus neoformans.

Authors:  Indrani Bose; Amy J Reese; Jeramia J Ory; Guilhem Janbon; Tamara L Doering
Journal:  Eukaryot Cell       Date:  2003-08

4.  Sex-induced silencing defends the genome of Cryptococcus neoformans via RNAi.

Authors:  Xuying Wang; Yen-Ping Hsueh; Wenjun Li; Anna Floyd; Rebecca Skalsky; Joseph Heitman
Journal:  Genes Dev       Date:  2010-11-15       Impact factor: 11.361

5.  Cryptococcus neoformans {alpha} strains preferentially disseminate to the central nervous system during coinfection.

Authors:  Kirsten Nielsen; Gary M Cox; Anastasia P Litvintseva; Eleftherios Mylonakis; Stephanie D Malliaris; Daniel K Benjamin; Steven S Giles; Thomas G Mitchell; Arturo Casadevall; John R Perfect; Joseph Heitman
Journal:  Infect Immun       Date:  2005-08       Impact factor: 3.441

6.  Evolution and diversification of RNA silencing proteins in fungi.

Authors:  Hitoshi Nakayashiki; Naoki Kadotani; Shigeyuki Mayama
Journal:  J Mol Evol       Date:  2006-06-16       Impact factor: 2.395

7.  An efficient fungal RNA-silencing system using the DsRed reporter gene.

Authors:  Danielle Janus; Birgit Hoff; Eckhard Hofmann; Ulrich Kück
Journal:  Appl Environ Microbiol       Date:  2006-12-01       Impact factor: 4.792

8.  Silencing of six hydrophobins in Cladosporium fulvum: complexities of simultaneously targeting multiple genes.

Authors:  Hélène Lacroix; Pietro D Spanu
Journal:  Appl Environ Microbiol       Date:  2008-11-14       Impact factor: 4.792

9.  Three galactose inducible promoters for use in C. neoformans var. grubii.

Authors:  Jack A Ruff; Jennifer K Lodge; Lorina G Baker
Journal:  Fungal Genet Biol       Date:  2008-10-14       Impact factor: 3.495

10.  Silencing of mitochondrial alternative oxidase gene of Aspergillus fumigatus enhances reactive oxygen species production and killing of the fungus by macrophages.

Authors:  Taisa Magnani; Frederico Marianetti Soriani; Vicente de Paulo Martins; Anna Carolina de Freitas Policarpo; Carlos Artério Sorgi; Lúcia Helena Faccioli; Carlos Curti; Sérgio Akira Uyemura
Journal:  J Bioenerg Biomembr       Date:  2009-01-16       Impact factor: 2.945

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