Literature DB >> 11856833

X-ray scattering studies of Aspergillus flavus urate oxidase: towards a better understanding of PEG effects on the crystallization of large proteins.

D Vivarès1, F Bonneté.   

Abstract

The determination of the three-dimensional structures of biological macromolecules by X-ray diffraction generally requires large good-quality crystals, which are often difficult to obtain as crystal nucleation and growth depend upon a great number of physicochemical parameters. In the future, the emergence of structural genomic projects will require new and rapid methods to determine crystallization conditions. Until now, the prediction of crystallization conditions has essentially been based on the knowledge of interparticular interactions in solutions inferred from studies on small soluble proteins in the presence of salts. The present study, by small-angle X-ray scattering, of urate oxidase from Aspergillus flavus, a homotetrameric enzyme of 128kDa, allowed the extension of the results to the crystallization of large proteins in the presence of polyethylene glycol (PEG). The protein crystallization, the nucleation rate and the different morphological crystal shapes obtained were correlated with the second virial coefficient (A(2)), which was found to be in a restricted range at the low end of the 'crystallization slot' proposed by George & Wilson [(1994). Acta Cryst. D50, 361--365].

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Year:  2002        PMID: 11856833     DOI: 10.1107/s0907444902000124

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  11 in total

1.  A preliminary neutron diffraction study of rasburicase, a recombinant urate oxidase enzyme, complexed with 8-azaxanthin.

Authors:  Monika Budayova-Spano; Françoise Bonneté; Natalie Ferté; Mohamed El Hajji; Flora Meilleur; Matthew Paul Blakeley; Bertrand Castro
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-02-28

2.  Patterns of protein protein interactions in salt solutions and implications for protein crystallization.

Authors:  André C Dumetz; Ann M Snellinger-O'brien; Eric W Kaler; Abraham M Lenhoff
Journal:  Protein Sci       Date:  2007-09       Impact factor: 6.725

Review 3.  The development and characterization of protein-based stationary phases for studying drug-protein and protein-protein interactions.

Authors:  Mitesh Sanghvi; Ruin Moaddel; Irving W Wainer
Journal:  J Chromatogr A       Date:  2011-05-27       Impact factor: 4.759

4.  Experimental determination of second virial coefficients by small-angle X-ray scattering: a problem revisited.

Authors:  Tyler Mrozowich; Donald J Winzor; David J Scott; Trushar R Patel
Journal:  Eur Biophys J       Date:  2019-10-31       Impact factor: 1.733

5.  Self-interaction chromatography of proteins on a microfluidic monolith.

Authors:  Cristina Martin; Abraham M Lenhoff
Journal:  Biochem Eng J       Date:  2011-01-15       Impact factor: 3.978

6.  Rationalization of membrane protein crystallization with polyethylene glycol using a simple depletion model.

Authors:  Shinpei Tanaka; Mitsuo Ataka; Kazuo Onuma; Tomomi Kubota
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

Review 7.  Serum uric acid-lowering therapies: where are we heading in management of hyperuricemia and the potential role of uricase.

Authors:  John S Bomalaski; Mike A Clark
Journal:  Curr Rheumatol Rep       Date:  2004-06       Impact factor: 4.592

8.  Urate oxidase purification by salting-in crystallization: towards an alternative to chromatography.

Authors:  Marion Giffard; Natalie Ferté; François Ragot; Mohamed El Hajji; Bertrand Castro; Françoise Bonneté
Journal:  PLoS One       Date:  2011-05-11       Impact factor: 3.240

9.  Deamidation of the human eye lens protein γS-crystallin accelerates oxidative aging.

Authors:  Brenna Norton-Baker; Pedram Mehrabi; Ashley O Kwok; Kyle W Roskamp; Megan A Rocha; Marc A Sprague-Piercy; David von Stetten; R J Dwayne Miller; Rachel W Martin
Journal:  Structure       Date:  2022-03-25       Impact factor: 5.871

10.  Defined PEG smears as an alternative approach to enhance the search for crystallization conditions and crystal-quality improvement in reduced screens.

Authors:  Apirat Chaikuad; Stefan Knapp; Frank von Delft
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-07-28
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