Literature DB >> 11851388

Isotope effects in the study of phosphoryl and sulfuryl transfer reactions.

Alvan C Hengge1.   

Abstract

Phosphoryl and sulfuryl transfer reactions are essential biological processes. Multiple kinetic isotope effects have provided significant insights into the transition states of these reactions. The data are reviewed for the uncatalyzed reactions of phosphate and sulfate monoesters and for a number of enzymatic phosphoryl transfer reactions. Uncatalyzed phosphoryl and sulfuryl hydrolysis reactions are found to have very similar transition states. The phosphoryl transfer reaction catalyzed by protein-tyrosine phosphatases proceeds by a transition state very similar to that of the uncatalyzed reaction, but isotope effect data reveal an interesting interplay between the conserved arginine and enzyme dynamics involving general acid catalysis.

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Year:  2002        PMID: 11851388     DOI: 10.1021/ar000143q

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  50 in total

1.  Characterization of the reaction path and transition states for RNA transphosphorylation models from theory and experiment.

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Journal:  Angew Chem Int Ed Engl       Date:  2011-11-11       Impact factor: 15.336

Review 2.  Biological phosphoryl-transfer reactions: understanding mechanism and catalysis.

Authors:  Jonathan K Lassila; Jesse G Zalatan; Daniel Herschlag
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

3.  Multiscale methods for computational RNA enzymology.

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Journal:  Methods Enzymol       Date:  2015-01-22       Impact factor: 1.600

Review 4.  Kinetic isotope effects in the characterization of catalysis by protein tyrosine phosphatases.

Authors:  Alvan C Hengge
Journal:  Biochim Biophys Acta       Date:  2015-04-01

5.  Alkaline phosphatase mono- and diesterase reactions: comparative transition state analysis.

Authors:  Jesse G Zalatan; Daniel Herschlag
Journal:  J Am Chem Soc       Date:  2006-02-01       Impact factor: 15.419

6.  Altered transition state for the reaction of an RNA model catalyzed by a dinuclear zinc(II) catalyst.

Authors:  Tim Humphry; Subashree Iyer; Olga Iranzo; Janet R Morrow; John P Richard; Piotr Paneth; Alvan C Hengge
Journal:  J Am Chem Soc       Date:  2008-12-31       Impact factor: 15.419

7.  Cleaning Up Mechanistic Debris Generated by Twister Ribozymes Using Computational RNA Enzymology.

Authors:  Colin S Gaines; Timothy J Giese; Darrin M York
Journal:  ACS Catal       Date:  2019-05-22       Impact factor: 13.084

8.  Effect of Zn2+ binding and enzyme active site on the transition state for RNA 2'-O-transphosphorylation interpreted through kinetic isotope effects.

Authors:  Haoyuan Chen; Joseph A Piccirilli; Michael E Harris; Darrin M York
Journal:  Biochim Biophys Acta       Date:  2015-03-23

Review 9.  Fidelity of Nucleotide Incorporation by the RNA-Dependent RNA Polymerase from Poliovirus.

Authors:  C E Cameron; I M Moustafa; J J Arnold
Journal:  Enzymes       Date:  2016-03-28

Review 10.  Experimental analyses of the chemical dynamics of ribozyme catalysis.

Authors:  Michael E Harris; Adam G Cassano
Journal:  Curr Opin Chem Biol       Date:  2008-10-24       Impact factor: 8.822

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