Literature DB >> 11849955

Engineered allosteric ribozymes as biosensor components.

Ronald R Breaker1.   

Abstract

RNA and DNA molecules can be engineered to function as molecular switches that trigger catalytic events when a specific target molecule becomes bound. Recent studies on the underlying biochemical properties of these constructs indicate that a significant untapped potential exists for the practical application of allosteric nucleic acids. Engineered molecular switches can be used to report the presence of specific analytes in complex mixtures, making possible the creation of new types of biosensor devices and genetic control elements.

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Year:  2002        PMID: 11849955     DOI: 10.1016/s0958-1669(02)00281-1

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  57 in total

1.  A biosensor for theophylline based on fluorescence detection of ligand-induced hammerhead ribozyme cleavage.

Authors:  Phillip T Sekella; David Rueda; Nils G Walter
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

2.  A versatile communication module for controlling RNA folding and catalysis.

Authors:  Alexis Kertsburg; Garrett A Soukup
Journal:  Nucleic Acids Res       Date:  2002-11-01       Impact factor: 16.971

3.  Label-free catalytic and molecular beacon containing an abasic site for sensitive fluorescent detection of small inorganic and organic molecules.

Authors:  Panshu Song; Yu Xiang; Hang Xing; Zhaojuan Zhou; Aijun Tong; Yi Lu
Journal:  Anal Chem       Date:  2012-03-07       Impact factor: 6.986

Review 4.  Rube Goldberg goes (ribo)nuclear? Molecular switches and sensors made from RNA.

Authors:  Scott K Silverman
Journal:  RNA       Date:  2003-04       Impact factor: 4.942

5.  Mechanism for gene control by a natural allosteric group I ribozyme.

Authors:  Andy G Y Chen; Narasimhan Sudarsan; Ronald R Breaker
Journal:  RNA       Date:  2011-09-29       Impact factor: 4.942

6.  Kinetic analysis of aptazyme-regulated gene expression in a cell-free translation system: modeling of ligand-dependent and -independent expression.

Authors:  Shungo Kobori; Norikazu Ichihashi; Yasuaki Kazuta; Tomoaki Matsuura; Tetsuya Yomo
Journal:  RNA       Date:  2012-06-25       Impact factor: 4.942

Review 7.  Riboswitches and the RNA world.

Authors:  Ronald R Breaker
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-02-01       Impact factor: 10.005

Review 8.  Colorimetric biosensors based on DNAzyme-assembled gold nanoparticles.

Authors:  Juewen Liu; Yi Lu
Journal:  J Fluoresc       Date:  2004-07       Impact factor: 2.217

9.  Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs.

Authors:  Alexander Serganov; Yu-Ren Yuan; Olga Pikovskaya; Anna Polonskaia; Lucy Malinina; Anh Tuân Phan; Claudia Hobartner; Ronald Micura; Ronald R Breaker; Dinshaw J Patel
Journal:  Chem Biol       Date:  2004-12

Review 10.  Computational analysis of riboswitch-based regulation.

Authors:  Eric I Sun; Dmitry A Rodionov
Journal:  Biochim Biophys Acta       Date:  2014-02-28
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