Literature DB >> 11844764

rRNA promoter activity in the fast-growing bacterium Vibrio natriegens.

Sarah E Aiyar1, Tamas Gaal, Richard L Gourse.   

Abstract

The bacterium Vibrio natriegens can double with a generation time of less than 10 min (R. G. Eagon, J. Bacteriol. 83:736-737, 1962), a growth rate that requires an extremely high rate of protein synthesis. We show here that V. natriegens' high potential for protein synthesis results from an increase in ribosome numbers with increasing growth rate, as has been found for other bacteria. We show that V. natriegens contains a large number of rRNA operons, and its rRNA promoters are extremely strong. The V. natriegens rRNA core promoters are at least as active in vitro as Escherichia coli rRNA core promoters with either E. coli RNA polymerase (RNAP) or V. natriegens RNAP, and they are activated by UP elements, as in E. coli. In addition, the E. coli transcription factor Fis activated V. natriegens rrn P1 promoters in vitro. We conclude that the high capacity for ribosome synthesis in V. natriegens results from a high capacity for rRNA transcription, and the high capacity for rRNA transcription results, at least in part, from the same factors that contribute most to high rates of rRNA transcription in E. coli, i.e., high gene dose and strong activation by UP elements and Fis.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 11844764      PMCID: PMC134863          DOI: 10.1128/JB.184.5.1349-1358.2002

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  45 in total

1.  Fine structure of E. coli RNA polymerase-promoter interactions: alpha subunit binding to the UP element minor groove.

Authors:  W Ross; A Ernst; R L Gourse
Journal:  Genes Dev       Date:  2001-03-01       Impact factor: 11.361

2.  Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli.

Authors:  C A Hirvonen; W Ross; C E Wozniak; E Marasco; J R Anthony; S E Aiyar; V H Newburn; R L Gourse
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

3.  Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro.

Authors:  M M Barker; T Gaal; C A Josaitis; R L Gourse
Journal:  J Mol Biol       Date:  2001-01-26       Impact factor: 5.469

Review 4.  UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition.

Authors:  R L Gourse; W Ross; T Gaal
Journal:  Mol Microbiol       Date:  2000-08       Impact factor: 3.501

5.  Pseudomonas natriegens, a marine bacterium with a generation time of less than 10 minutes.

Authors:  R G EAGON
Journal:  J Bacteriol       Date:  1962-04       Impact factor: 3.490

6.  Effects of sodium and potassium ions on growth and substrate penetration of a marine pseudomonad.

Authors:  W J PAYNE
Journal:  J Bacteriol       Date:  1960-11       Impact factor: 3.490

7.  rRNA operon copy number reflects ecological strategies of bacteria.

Authors:  J A Klappenbach; J M Dunbar; T M Schmidt
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

8.  Regulation of rRNA transcription correlates with nucleoside triphosphate sensing.

Authors:  M M Barker; R L Gourse
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

9.  Promoter recognition and discrimination by EsigmaS RNA polymerase.

Authors:  T Gaal; W Ross; S T Estrem; L H Nguyen; R R Burgess; R L Gourse
Journal:  Mol Microbiol       Date:  2001-11       Impact factor: 3.501

10.  DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae.

Authors:  J F Heidelberg; J A Eisen; W C Nelson; R A Clayton; M L Gwinn; R J Dodson; D H Haft; E K Hickey; J D Peterson; L Umayam; S R Gill; K E Nelson; T D Read; H Tettelin; D Richardson; M D Ermolaeva; J Vamathevan; S Bass; H Qin; I Dragoi; P Sellers; L McDonald; T Utterback; R D Fleishmann; W C Nierman; O White; S L Salzberg; H O Smith; R R Colwell; J J Mekalanos; J C Venter; C M Fraser
Journal:  Nature       Date:  2000-08-03       Impact factor: 49.962

View more
  37 in total

1.  Lessons from the genome of a lithoautotroph: making biomass from almost nothing.

Authors:  Juan-Luis Ramos
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

2.  Comparison of the effects of environmental parameters on growth rates of Vibrio vulnificus biotypes I, II, and III by culture and quantitative PCR analysis.

Authors:  Eva Chase; Valerie J Harwood
Journal:  Appl Environ Microbiol       Date:  2011-04-22       Impact factor: 4.792

3.  A role for mechanosensitive channels in survival of stationary phase: regulation of channel expression by RpoS.

Authors:  Neil R Stokes; Heath D Murray; Chandrasekaran Subramaniam; Richard L Gourse; Petra Louis; Wendy Bartlett; Samantha Miller; Ian R Booth
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-11       Impact factor: 11.205

Review 4.  Biodiversity of vibrios.

Authors:  Fabiano L Thompson; Tetsuya Iida; Jean Swings
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

5.  Seasonal dynamics and modeling of a Vibrio community in coastal waters of the North Sea.

Authors:  Sonja Oberbeckmann; Bernhard M Fuchs; Mirja Meiners; Antje Wichels; Karen H Wiltshire; Gunnar Gerdts
Journal:  Microb Ecol       Date:  2011-12-28       Impact factor: 4.552

6.  Global analysis of proteins synthesized by Mycobacterium smegmatis provides direct evidence for physiological heterogeneity in stationary-phase cultures.

Authors:  Marian C J Blokpoel; Marjan J Smeulders; Julia A M Hubbard; Jacquie Keer; Huw D Williams
Journal:  J Bacteriol       Date:  2005-10       Impact factor: 3.490

7.  Coordinated high-light response of genes encoding subunits of photosystem I is achieved by AT-rich upstream sequences in the cyanobacterium Synechocystis sp. strain PCC 6803.

Authors:  Masayuki Muramatsu; Yukako Hihara
Journal:  J Bacteriol       Date:  2007-02-02       Impact factor: 3.490

8.  Localization of rRNA synthesis in Bacillus subtilis: characterization of loci involved in transcription focus formation.

Authors:  Karen M Davies; Peter J Lewis
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

9.  Cell-free Protein Expression Using the Rapidly Growing Bacterium Vibrio natriegens.

Authors:  Daniel J Wiegand; Henry H Lee; Nili Ostrov; George M Church
Journal:  J Vis Exp       Date:  2019-03-14       Impact factor: 1.355

10.  Identification of Vibrio natriegens uvrA and uvrB genes and analysis of gene regulation using transcriptional reporter plasmids.

Authors:  Keryn L Simons; Susan M Thomas; Peter A Anderson
Journal:  J Microbiol       Date:  2010-11-03       Impact factor: 3.422

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.