Literature DB >> 11842147

Differential substrate inhibition couples kinetically distinct 4-coumarate:coenzyme a ligases with spatially distinct metabolic roles in quaking aspen.

Scott A Harding1, Jacqueline Leshkevich, Vincent L Chiang, Chung-Jui Tsai.   

Abstract

4-Coumarate:coenzyme A ligase (4CL) activates hydroxycinnamates for entry into phenylpropanoid branchways that support various metabolic activities, including lignification and flavonoid biosynthesis. However, it is not clear whether and how 4CL proteins with their broad substrate specificities fulfill the specific hydroxycinnamate requirements of the branchways they supply. Two tissue-specific 4CLs, Pt4CL1 and Pt4CL2, have previously been cloned from quaking aspen (Populus tremuloides Michx.), but whether they are catalytically adapted for the distinctive metabolic roles they are thought to support is not apparent from published biochemical data. Therefore, single- and mixed-substrate assays were conducted to determine whether the 4CLs from aspen exhibit clear catalytic identities under certain metabolic circumstances. Recombinant Pt4CL1 and Pt4CL2 exhibited the expected preference for p-coumarate in single-substrate assays, but strong competitive inhibition favored utilization of caffeate and p-coumarate, respectively, in mixed-substrate assays. The Pt4CL1 product, caffeoyl-CoA, predominated in mixed-substrate assays with xylem extract, and this was consistent with the near absence of Pt4CL2 expression in xylem tissue as determined by in situ hybridization. It is interesting that the Pt4CL2 product p-coumaroyl-CoA predominated in assays with developing leaf extract, although in situ hybridization revealed that both genes were coexpressed. The xylem extract and recombinant 4CL1 data allow us to advance a mechanism by which 4CL1 can selectively utilize caffeate for the support of monolignol biosynthesis in maturing xylem and phloem fibers. Loblolly pine (Pinus taeda), in contrast, possesses a single 4CL protein exhibiting broad substrate specificity in mixed-substrate assays. We discuss these 4CL differences in terms of the contrasts in lignification between angiosperm trees and their gymnosperm progenitors.

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Year:  2002        PMID: 11842147      PMCID: PMC148906          DOI: 10.1104/pp.010603

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  29 in total

1.  Cinnamyl Alcohol Dehydrogenase: Identification of New Sites of Promoter Activity in Transgenic Poplar.

Authors:  S. Hawkins; J. Samaj; V. Lauvergeat; A. Boudet; J. Grima-Pettenati
Journal:  Plant Physiol       Date:  1997-02       Impact factor: 8.340

2.  4-Coumarate:CoA ligase from cell suspension cultures of Petroselinum hortense Hoffm. Partial purification, substrate specificity, and further properties.

Authors:  K H Knobloch; K Hahlbrock
Journal:  Arch Biochem Biophys       Date:  1977-11       Impact factor: 4.013

3.  Compartmentalized expression of two structurally and functionally distinct 4-coumarate:CoA ligase genes in aspen (Populus tremuloides).

Authors:  W J Hu; A Kawaoka; C J Tsai; J Lung; K Osakabe; H Ebinuma; V L Chiang
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

4.  Coniferyl aldehyde 5-hydroxylation and methylation direct syringyl lignin biosynthesis in angiosperms.

Authors:  K Osakabe; C C Tsao; L Li; J L Popko; T Umezawa; D T Carraway; R H Smeltzer; C P Joshi; V L Chiang
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

5.  Mutational analysis of 4-coumarate:CoA ligase identifies functionally important amino acids and verifies its close relationship to other adenylate-forming enzymes.

Authors:  H Stuible; D Büttner; J Ehlting; K Hahlbrock; E Kombrink
Journal:  FEBS Lett       Date:  2000-02-04       Impact factor: 4.124

6.  Phenolic metabolism in petunia tissues. IV. - Properties of p-coumarate : coenzyme A ligase isoenzymes.

Authors:  R Ranjeva; A M Boudet; R Faggion
Journal:  Biochimie       Date:  1976       Impact factor: 4.079

7.  Immunocytochemical localization of phenylalanine ammonia-lyase in tissues of Populus kitakamiensis.

Authors:  Y Osakabe; K Nanto; H Kitamura; S Kawai; Y Kondo; T Fujii; K Takabe; Y Katayama; N Morohoshi
Journal:  Planta       Date:  1996       Impact factor: 4.116

8.  Three 4-coumarate:coenzyme A ligases in Arabidopsis thaliana represent two evolutionarily divergent classes in angiosperms.

Authors:  J Ehlting; D Büttner; Q Wang; C J Douglas; I E Somssich; E Kombrink
Journal:  Plant J       Date:  1999-07       Impact factor: 6.417

9.  Structural Characterization of Modified Lignin in Transgenic Tobacco Plants in Which the Activity of 4-Coumarate:Coenzyme A Ligase Is Depressed.

Authors:  S. Kajita; S. Hishiyama; Y. Tomimura; Y. Katayama; S. Omori
Journal:  Plant Physiol       Date:  1997-07       Impact factor: 8.340

10.  Molecular cloning and expression of 4-coumarate:coenzyme A ligase, an enzyme involved in the resistance response of soybean (Glycine max L.) against pathogen attack.

Authors:  A Uhlmann; J Ebel
Journal:  Plant Physiol       Date:  1993-08       Impact factor: 8.340

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  32 in total

1.  Characterization of NAC domain transcription factors implicated in control of vascular cell differentiation in Arabidopsis and Populus.

Authors:  Emily H Grant; Takeshi Fujino; Eric P Beers; Amy M Brunner
Journal:  Planta       Date:  2010-05-11       Impact factor: 4.116

Review 2.  The cell biology of lignification in higher plants.

Authors:  Jaime Barros; Henrik Serk; Irene Granlund; Edouard Pesquet
Journal:  Ann Bot       Date:  2015-04-15       Impact factor: 4.357

Review 3.  Cryopreservation in Populus functional genomics.

Authors:  Chung-Jui Tsai; Sandra L Hubscher
Journal:  New Phytol       Date:  2004-10       Impact factor: 10.151

4.  Compensatory Guaiacyl Lignin Biosynthesis at the Expense of Syringyl Lignin in 4CL1-Knockout Poplar.

Authors:  Chung-Jui Tsai; Peng Xu; Liang-Jiao Xue; Hao Hu; Batbayar Nyamdari; Radnaa Naran; Xiaohong Zhou; Geert Goeminne; Ruili Gao; Erica Gjersing; Joseph Dahlen; Sivakumar Pattathil; Michael G Hahn; Mark F Davis; John Ralph; Wout Boerjan; Scott A Harding
Journal:  Plant Physiol       Date:  2020-03-05       Impact factor: 8.340

5.  Chemical Genetics Uncovers Novel Inhibitors of Lignification, Including p-Iodobenzoic Acid Targeting CINNAMATE-4-HYDROXYLASE.

Authors:  Dorien Van de Wouwer; Ruben Vanholme; Raphaël Decou; Geert Goeminne; Dominique Audenaert; Long Nguyen; René Höfer; Edouard Pesquet; Bartel Vanholme; Wout Boerjan
Journal:  Plant Physiol       Date:  2016-08-02       Impact factor: 8.340

6.  Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa.

Authors:  Jack P Wang; Punith P Naik; Hsi-Chuan Chen; Rui Shi; Chien-Yuan Lin; Jie Liu; Christopher M Shuford; Quanzi Li; Ying-Hsuan Sun; Sermsawat Tunlaya-Anukit; Cranos M Williams; David C Muddiman; Joel J Ducoste; Ronald R Sederoff; Vincent L Chiang
Journal:  Plant Cell       Date:  2014-03-11       Impact factor: 11.277

7.  Differential expression patterns of two cellulose synthase genes are associated with primary and secondary cell wall development in aspen trees.

Authors:  Udaya C Kalluri; Chandrashekhar P Joshi
Journal:  Planta       Date:  2004-07-20       Impact factor: 4.116

8.  Suppression subtractive hybridization-mediated transcriptome analysis from multiple tissues of aspen (Populus tremuloides) altered in phenylpropanoid metabolism.

Authors:  Priya Ranjan; Yu-Ying Kao; Hongying Jiang; Chandrashekhar P Joshi; Scott A Harding; Chung-Jui Tsai
Journal:  Planta       Date:  2004-05-14       Impact factor: 4.116

9.  Monolignol pathway 4-coumaric acid:coenzyme A ligases in Populus trichocarpa: novel specificity, metabolic regulation, and simulation of coenzyme A ligation fluxes.

Authors:  Hsi-Chuan Chen; Jina Song; Cranos M Williams; Christopher M Shuford; Jie Liu; Jack P Wang; Quanzi Li; Rui Shi; Emine Gokce; Joel Ducoste; David C Muddiman; Ronald R Sederoff; Vincent L Chiang
Journal:  Plant Physiol       Date:  2013-01-23       Impact factor: 8.340

10.  The 4-coumarate:CoA ligase gene family in Arabidopsis thaliana comprises one rare, sinapate-activating and three commonly occurring isoenzymes.

Authors:  Björn Hamberger; Klaus Hahlbrock
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-09       Impact factor: 11.205

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