Literature DB >> 11836388

Interaction of translation initiation factor eIF4B with the poliovirus internal ribosome entry site.

Kerstin Ochs1, Lanja Saleh, Gergis Bassili, Volker H Sonntag, Amandus Zeller, Michael Niepmann.   

Abstract

Poliovirus translation is initiated at the internal ribosome entry site (IRES). Most likely involving the action of standard initiation factors, this highly structured cis element in the 5" noncoding region of the viral RNA guides the ribosome to an internal silent AUG. The actual start codon for viral protein synthesis further downstream is then reached by ribosomal scanning. In this study we show that two of the secondary structure elements of the poliovirus IRES, domain V and, to a minor extent, domain VI, are the determinants for binding of the eukaryotic initiation factor eIF4B. Several mutations in domain V which are known to greatly affect poliovirus growth also seriously impair the binding of eIF4B. The interaction of eIF4B with the IRES is not dependent on the presence of the polypyrimidine tract-binding protein, which also binds to the poliovirus IRES. In contrast to its weak interaction with cellular mRNAs, eIF4B remains tightly associated with the poliovirus IRES during the formation of complete 80S ribosomes. Binding of eIF4B to the IRES is energy dependent, and binding of the small ribosomal subunit to the IRES requires the previous energy-dependent association of initiation factors with the IRES. These results indicate that the interaction of eIF4B with the 3" region of the poliovirus IRES may be directly involved in translation initiation.

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Year:  2002        PMID: 11836388      PMCID: PMC135939          DOI: 10.1128/jvi.76.5.2113-2122.2002

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  48 in total

1.  Linker scanning mutagenesis of the internal ribosome entry site of poliovirus RNA.

Authors:  A A Haller; B L Semler
Journal:  J Virol       Date:  1992-08       Impact factor: 5.103

2.  Eukaryotic initiation factor (eIF)-4F. Implications for a role in internal initiation of translation.

Authors:  D D Anthony; W C Merrick
Journal:  J Biol Chem       Date:  1991-06-05       Impact factor: 5.157

3.  Further biochemical characterization of rabbit reticulocyte eIF-4B.

Authors:  D L Hughes; T E Dever; W C Merrick
Journal:  Arch Biochem Biophys       Date:  1993-03       Impact factor: 4.013

4.  Internal translation initiation on poliovirus RNA: further characterization of La function in poliovirus translation in vitro.

Authors:  Y V Svitkin; K Meerovitch; H S Lee; J N Dholakia; D J Kenan; V I Agol; N Sonenberg
Journal:  J Virol       Date:  1994-03       Impact factor: 5.103

5.  A cytoplasmic 57-kDa protein that is required for translation of picornavirus RNA by internal ribosomal entry is identical to the nuclear pyrimidine tract-binding protein.

Authors:  C U Hellen; G W Witherell; M Schmid; S H Shin; T V Pestova; A Gil; E Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  1993-08-15       Impact factor: 11.205

6.  In vitro mutational analysis of cis-acting RNA translational elements within the poliovirus type 2 5' untranslated region.

Authors:  K Meerovitch; R Nicholson; N Sonenberg
Journal:  J Virol       Date:  1991-11       Impact factor: 5.103

7.  La autoantigen enhances and corrects aberrant translation of poliovirus RNA in reticulocyte lysate.

Authors:  K Meerovitch; Y V Svitkin; H S Lee; F Lejbkowicz; D J Kenan; E K Chan; V I Agol; J D Keene; N Sonenberg
Journal:  J Virol       Date:  1993-07       Impact factor: 5.103

8.  The cellular polypeptide p57 (pyrimidine tract-binding protein) binds to multiple sites in the poliovirus 5' nontranslated region.

Authors:  C U Hellen; T V Pestova; M Litterst; E Wimmer
Journal:  J Virol       Date:  1994-02       Impact factor: 5.103

9.  Starting window, a distinct element in the cap-independent internal initiation of translation on picornaviral RNA.

Authors:  E V Pilipenko; A P Gmyl; S V Maslova; G A Belov; A N Sinyakov; M Huang; T D Brown; V I Agol
Journal:  J Mol Biol       Date:  1994-08-19       Impact factor: 5.469

10.  Dominant negative mutants of mammalian translation initiation factor eIF-4A define a critical role for eIF-4F in cap-dependent and cap-independent initiation of translation.

Authors:  A Pause; N Méthot; Y Svitkin; W C Merrick; N Sonenberg
Journal:  EMBO J       Date:  1994-03-01       Impact factor: 11.598

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  23 in total

1.  Eucaryotic initiation factor 4B controls eIF3-mediated ribosomal entry of viral reinitiation factor.

Authors:  Hyun-Sook Park; Karen S Browning; Thomas Hohn; Lyubov A Ryabova
Journal:  EMBO J       Date:  2004-02-26       Impact factor: 11.598

2.  Poliovirus unlinks TIA1 aggregation and mRNA stress granule formation.

Authors:  James P White; Richard E Lloyd
Journal:  J Virol       Date:  2011-09-28       Impact factor: 5.103

Review 3.  Bridging IRES elements in mRNAs to the eukaryotic translation apparatus.

Authors:  Kerry D Fitzgerald; Bert L Semler
Journal:  Biochim Biophys Acta       Date:  2009-07-23

4.  Impaired binding of standard initiation factors mediates poliovirus translation attenuation.

Authors:  Kerstin Ochs; Amandus Zeller; Lanja Saleh; Gergis Bassili; Yutong Song; Anja Sonntag; Michael Niepmann
Journal:  J Virol       Date:  2003-01       Impact factor: 5.103

5.  Molecular mechanism of poliovirus Sabin vaccine strain attenuation.

Authors:  Brian C Avanzino; Helen Jue; Clare M Miller; Emily Cheung; Gabriele Fuchs; Christopher S Fraser
Journal:  J Biol Chem       Date:  2018-08-20       Impact factor: 5.157

6.  Translation of cellular inhibitor of apoptosis protein 1 (c-IAP1) mRNA is IRES mediated and regulated during cell stress.

Authors:  Marc E Van Eden; Marshall P Byrd; Kyle W Sherrill; Richard E Lloyd
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

7.  Evidence for variation in the optimal translation initiation complex: plant eIF4B, eIF4F, and eIF(iso)4F differentially promote translation of mRNAs.

Authors:  Laura K Mayberry; M Leah Allen; Michael D Dennis; Karen S Browning
Journal:  Plant Physiol       Date:  2009-06-03       Impact factor: 8.340

8.  Molecular mechanisms of attenuation of the Sabin strain of poliovirus type 3.

Authors:  Stephen Guest; Evgeny Pilipenko; Kamal Sharma; Konstantin Chumakov; Raymond P Roos
Journal:  J Virol       Date:  2004-10       Impact factor: 5.103

9.  In vitro molecular characterization of RNA-proteins interactions during initiation of translation of a wild-type and a mutant Coxsackievirus B3 RNAs.

Authors:  Amira Souii; Manel Ben M'hadheb-Gharbi; Mahjoub Aouni; Jawhar Gharbi
Journal:  Mol Biotechnol       Date:  2013-06       Impact factor: 2.695

10.  Cleavage of poly(A)-binding protein by poliovirus 3C proteinase inhibits viral internal ribosome entry site-mediated translation.

Authors:  Jennifer M Bonderoff; Jennifer L Larey; Richard E Lloyd
Journal:  J Virol       Date:  2008-07-16       Impact factor: 5.103

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