Literature DB >> 11836230

Locating probable genes using Fourier transform approach.

Biju Issac1, Harpreet Singh, Harpreet Kaur, G P S Raghava.   

Abstract

FTG is a web server for analyzing nucleotide sequences to predict the genes using Fourier transform techniques. This server implements the existing Fourier transform algorithms for gene prediction and allows the rapid visualization of analysis by output in GIF format.

Mesh：

Year:  2002        PMID： 11836230     DOI： 10.1093/bioinformatics/18.1.196

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  12 in total

1.  A hybrid technique for the periodicity characterization of genomic sequence data.

Authors:  Julien Epps
Journal:  EURASIP J Bioinform Syst Biol       Date:  2009-04-08

2.  Serum-dependent selective expression of EhTMKB1-9, a member of Entamoeba histolytica B1 family of transmembrane kinases.

Authors:  Shiteshu Shrimal; Sudha Bhattacharya; Alok Bhattacharya
Journal:  PLoS Pathog       Date:  2010-06-03       Impact factor: 6.823

3.  Design of high-performance parallelized gene predictors in MATLAB.

Authors:  Sylvain Robert Rivard; Jean-Gabriel Mailloux; Rachid Beguenane; Hung Tien Bui
Journal:  BMC Res Notes       Date:  2012-04-10

4.  Profile-statistical periodicity of DNA coding regions.

Authors:  Maria Chaley; Vladimir Kutyrkin
Journal:  DNA Res       Date:  2011-07-25       Impact factor: 4.458

5.  Origin of multiple periodicities in the Fourier power spectra of the Plasmodium falciparum genome.

Authors:  Miriam C S Nunes; Elizabeth F Wanner; Gerald Weber
Journal:  BMC Genomics       Date:  2011-12-22       Impact factor: 3.969

6.  Protein coding sequence identification by simultaneously characterizing the periodic and random features of DNA sequences.

Authors:  Jianbo Gao; Yan Qi; Yinhe Cao; Wen-wen Tung
Journal:  J Biomed Biotechnol       Date:  2005-06-30

7.  On relationship of Z-curve and Fourier approaches for DNA coding sequence classification.

Authors:  Ngai-Fong Law; Kin-On Cheng; Wan-Chi Siu
Journal:  Bioinformation       Date:  2006-11-14

8.  [Chromosomal localization and molecular organization of human genomic fragment containing TNF/LT locus in transgenic mice].

Authors:  A R Galimov; A A Kruglov; N L Bol'sheva; O Iu Iurkevich; D Ia Lipin'sh; I A Mufazalov; D V Kuprash; S A Nedospasov
Journal:  Mol Biol (Mosk)       Date:  2008 Jul-Aug

9.  Using triplet periodicity of nucleotide sequences for finding potential reading frame shifts in genes.

Authors:  F E Frenkel; E V Korotkov
Journal:  DNA Res       Date:  2009-03-03       Impact factor: 4.458

10.  Role of thymine in protein coding frames of mRNA sequences.

Authors:  Perumal Anandagopu; Sivakumar Suhanya; Veerasamy Jayaraj; Ekambaram Rajasekaran
Journal:  Bioinformation       Date:  2008-04-19
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