Literature DB >> 11831904

New type of metalloproteinase inhibitor: design and synthesis of new phosphonamide-based hydroxamic acids.

Masaaki Sawa1, Takao Kiyoi, Kiriko Kurokawa, Hiroshi Kumihara, Minoru Yamamoto, Tomohiro Miyasaka, Yasuko Ito, Ryoichi Hirayama, Tomomi Inoue, Yasuyuki Kirii, Eiji Nishiwaki, Hiroshi Ohmoto, Yu Maeda, Etsuko Ishibushi, Yoshimasa Inoue, Kohichiro Yoshino, Hirosato Kondo.   

Abstract

A series of phosphonamide-based hydroxamate derivatives were synthesized, and the inhibitory activities were evaluated against various metalloproteinases in order to clarify its selectivity profile. Among the four diastereomeric isomers resulting from the chirality at the C-3 and P atoms, the compound with a (R,R)-configuration both at the C-3 position and the phosphorus atom was found to be potently active, while the other diastereomeric isomers were almost inactive. A number of (R,R)-compounds synthesized here exhibited broad spectrum activities with nanomolar K(i) values against MMP-1, -3, -9, and TACE and also showed nanomolar IC(50) values against HB-EGF shedding in a cell-based inhibition assay. The modeling study using X-ray structure of MMP-3 suggested the possible binding mode of the phosphonamide-based inhibitors.

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Year:  2002        PMID: 11831904     DOI: 10.1021/jm0103211

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  12 in total

1.  A combination of docking, QM/MM methods, and MD simulation for binding affinity estimation of metalloprotein ligands.

Authors:  Akash Khandelwal; Viera Lukacova; Dogan Comez; Daniel M Kroll; Soumyendu Raha; Stefan Balaz
Journal:  J Med Chem       Date:  2005-08-25       Impact factor: 7.446

2.  Processing multimode binding situations in simulation-based prediction of ligand-macromolecule affinities.

Authors:  Akash Khandelwal; Viera Lukacova; Daniel M Kroll; Soumyendu Raha; Dogan Comez; Stefan Balaz
Journal:  J Phys Chem A       Date:  2005-07-28       Impact factor: 2.781

3.  Improved estimation of ligand-macromolecule binding affinities by linear response approach using a combination of multi-mode MD simulation and QM/MM methods.

Authors:  Akash Khandelwal; Stefan Balaz
Journal:  J Comput Aided Mol Des       Date:  2007-02-28       Impact factor: 3.686

4.  A comparison of the binding sites of matrix metalloproteinases and tumor necrosis factor-alpha converting enzyme: implications for selectivity.

Authors:  Viera Lukacova; Yufen Zhang; Daniel M Kroll; Soumyendu Raha; Dogan Comez; Stefan Balaz
Journal:  J Med Chem       Date:  2005-04-07       Impact factor: 7.446

5.  Enantioselective hydrogen-bond-donor catalysis to access diverse stereogenic-at-P(V) compounds.

Authors:  Katherine C Forbes; Eric N Jacobsen
Journal:  Science       Date:  2022-06-09       Impact factor: 63.714

6.  Direct phosphorylation of benzylic C-H bonds under transition metal-free conditions forming sp3C-P bonds.

Authors:  Qiang Li; Chang-Qiu Zhao; Tieqiao Chen; Li-Biao Han
Journal:  RSC Adv       Date:  2022-06-24       Impact factor: 4.036

Review 7.  Extracellular proteases as targets for drug development.

Authors:  Mare Cudic; Gregg B Fields
Journal:  Curr Protein Pept Sci       Date:  2009-08       Impact factor: 3.272

8.  QM/MM linear response method distinguishes ligand affinities for closely related metalloproteins.

Authors:  Akash Khandelwal; Stefan Balaz
Journal:  Proteins       Date:  2007-11-01

9.  Improving the hyperpolarization of (31)P nuclei by synthetic design.

Authors:  Michael J Burns; Peter J Rayner; Gary G R Green; Louise A R Highton; Ryan E Mewis; Simon B Duckett
Journal:  J Phys Chem B       Date:  2015-04-06       Impact factor: 2.991

10.  The Aryne Phosphate Reaction.

Authors:  Thomas M Haas; Stefan Wiesler; Tobias Dürr-Mayer; Alexander Ripp; Paraskevi Fouka; Danye Qiu; Henning J Jessen
Journal:  Angew Chem Int Ed Engl       Date:  2021-11-22       Impact factor: 16.823

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