Literature DB >> 11827528

Abietadiene synthase catalysis: conserved residues involved in protonation-initiated cyclization of geranylgeranyl diphosphate to (+)-copalyl diphosphate.

Reuben J Peters1, Rodney B Croteau.   

Abstract

Abietadiene synthase catalyzes two sequential, mechanistically distinct cyclization reactions in the formation of a mixture of abietadiene double bond isomers as the committed step in resin acid biosynthesis. Each reaction is carried out at a separate active site residing in a structurally distinct domain, and the reactions are kinetically separable. The first cyclization reaction is initiated by protonation of the terminal double bond of the universal diterpene precursor, geranylgeranyl diphosphate. The pH dependence of the overall reaction is consistent with an acid-base catalytic mechanism, and a divalent metal ion plays a role in this reaction probably by binding the diphosphate moiety to assist in positioning the substrate for catalysis. A putative active site for the protonation-initiated cyclization was defined by modeling abietadiene synthase and locating the DXDD motif previously shown to be involved in this reaction. A number of charged and aromatic residues, which are highly conserved in mechanistically related diterpene cyclases, line the putative active site. Alanine substitutions were made for each of these residues, as were asparagine and glutamate substitutions for the aspartates of the DXDD motif. Kinetic evaluation confirmed the involvement of most of the targeted residues in the reaction, and analysis of mutational effects on the pH-activity profile and affinity for a transition state analogue suggested specific roles for several of these residues in catalyzing the cyclization of geranylgeranyl diphosphate to (+)-copalyl diphosphate. A functional role was also suggested for the cryptic insertional element found in abietadiene synthase and other diterpene synthases that carry out similar protonation-initiated cyclizations.

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Year:  2002        PMID: 11827528     DOI: 10.1021/bi011879d

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  25 in total

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Authors:  Christopher I Keeling; Lina L Madilao; Philipp Zerbe; Harpreet K Dullat; Jörg Bohlmann
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2.  Characterization of two UDP-Gal:GalNAc-diphosphate-lipid β1,3-galactosyltransferases WbwC from Escherichia coli serotypes O104 and O5.

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Journal:  J Bacteriol       Date:  2014-06-23       Impact factor: 3.490

3.  The maize An2 gene is induced by Fusarium attack and encodes an ent-copalyl diphosphate synthase.

Authors:  L J Harris; A Saparno; A Johnston; S Prisic; M Xu; S Allard; A Kathiresan; T Ouellet; R J Peters
Journal:  Plant Mol Biol       Date:  2005-12       Impact factor: 4.076

4.  Insights into diterpene cyclization from structure of bifunctional abietadiene synthase from Abies grandis.

Authors:  Ke Zhou; Yang Gao; Julie A Hoy; Francis M Mann; Richard B Honzatko; Reuben J Peters
Journal:  J Biol Chem       Date:  2012-01-04       Impact factor: 5.157

Review 5.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

6.  Identification of syn-pimara-7,15-diene synthase reveals functional clustering of terpene synthases involved in rice phytoalexin/allelochemical biosynthesis.

Authors:  P Ross Wilderman; Meimei Xu; Yinghua Jin; Robert M Coates; Reuben J Peters
Journal:  Plant Physiol       Date:  2004-08-06       Impact factor: 8.340

Review 7.  Terpenoid synthase structures: a so far incomplete view of complex catalysis.

Authors:  Yang Gao; Richard B Honzatko; Reuben J Peters
Journal:  Nat Prod Rep       Date:  2012-08-21       Impact factor: 13.423

8.  A single residue switch for Mg(2+)-dependent inhibition characterizes plant class II diterpene cyclases from primary and secondary metabolism.

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Journal:  J Biol Chem       Date:  2010-04-29       Impact factor: 5.157

9.  Functional characterization of nine Norway Spruce TPS genes and evolution of gymnosperm terpene synthases of the TPS-d subfamily.

Authors:  Diane M Martin; Jenny Fäldt; Jörg Bohlmann
Journal:  Plant Physiol       Date:  2004-08-13       Impact factor: 8.340

10.  Characterization and inhibition of a class II diterpene cyclase from Mycobacterium tuberculosis: implications for tuberculosis.

Authors:  Francis M Mann; Sladjana Prisic; Huayou Hu; Meimei Xu; Robert M Coates; Reuben J Peters
Journal:  J Biol Chem       Date:  2009-07-02       Impact factor: 5.157

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