Literature DB >> 11825990

Use of pulsed-field gel electrophoresis, enterobacterial repetitive intergenic consensus typing, and automated ribotyping to assess genomic variability among strains of nontypeable Haemophilus influenzae.

M M Pettigrew1, B Foxman, Z Ecevit, C F Marrs, J Gilsdorf.   

Abstract

We compared 75 nontypeable (NT) Haemophilus influenzae isolates by pulsed-field gel electrophoresis (PFGE), enterobacterial repetitive intergenic consensus (ERIC)-PCR, and automated ribotyping. PFGE was the most discriminatory of the techniques. ERIC-PCR provides a useful screen but should not replace other techniques as the sole method to group NT H. influenzae strains.

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Year:  2002        PMID： 11825990      PMCID： PMC153392          DOI： 10.1128/JCM.40.2.660-662.2002

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  16 in total

1.  Subtyping of Haemophilus influenzae strains by pulsed-field gel electrophoresis.

Authors:  M Saito; A Umeda; S i Yoshida
Journal:  J Clin Microbiol       Date:  1999-07       Impact factor: 5.948

2.  Outer membrane protein profiles of paired nasopharyngeal and middle ear isolates of nontypable Haemophilus influenzae from Mexican children with acute otitis media.

Authors:  A Villaseñor-Sierra; J I Santos
Journal:  Clin Infect Dis       Date:  1999-02       Impact factor: 9.079

Review 3.  Short, interspersed repetitive DNA sequences in prokaryotic genomes.

Authors:  J R Lupski; G M Weinstock
Journal:  J Bacteriol       Date:  1992-07       Impact factor: 3.490

4.  Adhesin expression in matched nasopharyngeal and middle ear isolates of nontypeable Haemophilus influenzae from children with acute otitis media.

Authors:  G P Krasan; D Cutter; S L Block; J W St Geme
Journal:  Infect Immun       Date:  1999-01       Impact factor: 3.441

5.  Genomic variability of Haemophilus influenzae isolated from Mexican children determined by using enterobacterial repetitive intergenic consensus sequences and PCR.

Authors:  P Gomez-De-Leon; J I Santos; J Caballero; D Gomez; L E Espinosa; I Moreno; D Piñero; A Cravioto
Journal:  J Clin Microbiol       Date:  2000-07       Impact factor: 5.948

Review 6.  Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing.

Authors:  F C Tenover; R D Arbeit; R V Goering; P A Mickelsen; B E Murray; D H Persing; B Swaminathan
Journal:  J Clin Microbiol       Date:  1995-09       Impact factor: 5.948

7.  Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.

Authors:  R D Fleischmann; M D Adams; O White; R A Clayton; E F Kirkness; A R Kerlavage; C J Bult; J F Tomb; B A Dougherty; J M Merrick
Journal:  Science       Date:  1995-07-28       Impact factor: 47.728

8.  Comparative evaluation of an automated ribotyping system versus pulsed-field gel electrophoresis for epidemiological typing of clinical isolates of Escherichia coli and Pseudomonas aeruginosa from patients with recurrent gram-negative bacteremia.

Authors:  M A Pfaller; C Wendt; R J Hollis; R P Wenzel; S J Fritschel; J J Neubauer; L A Herwaldt
Journal:  Diagn Microbiol Infect Dis       Date:  1996-05       Impact factor: 2.803

9.  Comparison of hemagglutinating pili of Haemophilus influenzae type b with similar structures of nontypeable H. influenzae.

Authors:  J R Gilsdorf; H Y Chang; K W McCrea; L O Bakaletz
Journal:  Infect Immun       Date:  1992-02       Impact factor: 3.441

10.  Risk factors for otitis media and carriage of multiple strains of Haemophilus influenzae and Streptococcus pneumoniae.

Authors:  J St Sauver; C F Marrs; B Foxman; P Somsel; R Madera; J R Gilsdorf
Journal:  Emerg Infect Dis       Date:  2000 Nov-Dec       Impact factor: 6.883
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  13 in total

1.  Evaluation of genotyping large numbers of Escherichia coli isolates by enterobacterial repetitive intergenic consensus-PCR.

Authors:  Kiersten J Meacham; Lixin Zhang; Betsy Foxman; Richard J Bauer; Carl F Marrs
Journal:  J Clin Microbiol       Date:  2003-11       Impact factor: 5.948

Review 2.  Haemophilus influenzae: genetic variability and natural selection to identify virulence factors.

Authors:  Janet R Gilsdorf; Carl F Marrs; Betsy Foxman
Journal:  Infect Immun       Date:  2004-05       Impact factor: 3.441

3.  Genetic and molecular characterization of beta-lactamase-negative ampicillin-resistant Haemophilus influenzae with unusually high resistance to ampicillin.

Authors:  Frank S Kaczmarek; Thomas D Gootz; Fadia Dib-Hajj; Wenchi Shang; Shawn Hallowell; Melissa Cronan
Journal:  Antimicrob Agents Chemother       Date:  2004-05       Impact factor: 5.191

4.  Diversity of ampicillin resistance genes and antimicrobial susceptibility patterns in Haemophilus influenzae strains isolated in Korea.

Authors:  In-Suk Kim; Chang-Seok Ki; Sunjoo Kim; Won Sup Oh; Kyong Ran Peck; Jae-Hoon Song; Kyungwon Lee; Nam Yong Lee
Journal:  Antimicrob Agents Chemother       Date:  2006-11-20       Impact factor: 5.191

5.  Conservation and diversity of HMW1 and HMW2 adhesin binding domains among invasive nontypeable Haemophilus influenzae isolates.

Authors:  Maria Giufrè; Michele Muscillo; Patrizia Spigaglia; Rita Cardines; Paola Mastrantonio; Marina Cerquetti
Journal:  Infect Immun       Date:  2006-02       Impact factor: 3.441

6.  Molecular characterization of Haemophilus ducreyi isolates from different geographical locations.

Authors:  J Mbwana; I Bölin; E Lyamuya; F Mhalu; T Lagergård
Journal:  J Clin Microbiol       Date:  2006-01       Impact factor: 5.948

7.  Probe hybridization array typing: a binary typing method for Escherichia coli.

Authors:  U Srinivasan; L Zhang; A M France; D Ghosh; W Shalaby; J Xie; C F Marrs; B Foxman
Journal:  J Clin Microbiol       Date:  2006-11-01       Impact factor: 5.948

8.  Partial analysis of the genomes of two nontypeable Haemophilus influenzae otitis media isolates.

Authors:  Robert S Munson; Alistair Harrison; Allison Gillaspy; William C Ray; Matt Carson; David Armbruster; Jenny Gipson; Mandy Gipson; Linda Johnson; Lisa Lewis; David W Dyer; Lauren O Bakaletz
Journal:  Infect Immun       Date:  2004-05       Impact factor: 3.441

9.  Genetic diversity of paired middle-ear and pharyngeal nontypeable Haemophilus influenzae isolates from children with acute otitis media.

Authors:  Zachary J Berrens; Carl F Marrs; Melinda M Pettigrew; Sara A Sandstedt; Mayuri Patel; Janet R Gilsdorf
Journal:  J Clin Microbiol       Date:  2007-09-05       Impact factor: 5.948

10.  Implications of molecular genotyping of Helicobacter pylori isolates from different human populations by genomic fingerprinting of enterobacterial repetitive intergenic consensus regions for strain identification and geographic evolution.

Authors:  M Abid Hussain; Farhana Kauser; Aleem A Khan; Santosh Tiwari; Chittoor M Habibullah; Niyaz Ahmed
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948
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