Literature DB >> 11825891

Alternative splicing of the adenylyl cyclase stimulatory G-protein G alpha(s) is regulated by SF2/ASF and heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1) and involves the use of an unusual TG 3'-splice Site.

Alison J Pollard1, Adrian R Krainer, Stephen C Robson, G Nicholas Europe-Finner.   

Abstract

The factors involved in regulating alternative splicing of the human adenylyl cyclase stimulatory G-protein G alpha(s) in different cell types remain undefined. We have designed a G alpha(s) minigene that retains the signals required for G alpha(s) alternative splicing in vivo. Employing transient transfection of human myometrial smooth muscle cells and HeLa cells, as well as in vitro splicing assays, we have provided evidence that the antagonistic splicing factors SF2/ASF and hnRNPA1 act as potent regulators of G alpha(s) isoform expression in these cells. Both SF2/ASF and hnRNPA1 control the selection of competing 5'-splice sites and respectively promote inclusion or skipping of the small cassette-type exon 3 of G alpha(s) transcripts, resulting in the generation of G alpha(s)-long and G alpha(s)-short mRNA isoforms. We have also provided evidence that SF2/ASF and hnRNPA1 play a role in 3'-splice site selection involving the use of a non-canonical TG 3'-splice site preceding exon 4. Using a score-matrix analysis to identify putative exonic enhancer sequences (ESEs), we found multiple high score ESE motifs for SF2/ASF, SC35, and SRp40 in exon 3 of G alpha(s). These results suggest that tissue-specific expression of SF2/ASF and hnRNPA1 governs the expression of alternative isoforms of G alpha(s) in these different cells types.

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Year:  2002        PMID: 11825891     DOI: 10.1074/jbc.M109046200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  25 in total

1.  Missense mutations in hMLH1 and hMSH2 are associated with exonic splicing enhancers.

Authors:  Ivan P Gorlov; Olga Y Gorlova; Marsha L Frazier; Christopher I Amos
Journal:  Am J Hum Genet       Date:  2003-10-01       Impact factor: 11.025

Review 2.  Regulation of alternative RNA splicing by exon definition and exon sequences in viral and mammalian gene expression.

Authors:  Zhi-Ming Zheng
Journal:  J Biomed Sci       Date:  2004 May-Jun       Impact factor: 8.410

Review 3.  Therapeutic potential of splice-switching oligonucleotides.

Authors:  John Bauman; Natee Jearawiriyapaisarn; Ryszard Kole
Journal:  Oligonucleotides       Date:  2009-03

4.  Seemingly neutral polymorphic variants may confer immunity to splicing-inactivating mutations: a synonymous SNP in exon 5 of MCAD protects from deleterious mutations in a flanking exonic splicing enhancer.

Authors:  Karsten Bork Nielsen; Suzette Sørensen; Luca Cartegni; Thomas Juhl Corydon; Thomas Koed Doktor; Lisbeth Dahl Schroeder; Line Sinnathamby Reinert; Orly Elpeleg; Adrian R Krainer; Niels Gregersen; Jørgen Kjems; Brage Storstein Andresen
Journal:  Am J Hum Genet       Date:  2007-01-18       Impact factor: 11.025

5.  Constant splice-isoform ratios in human lymphoblastoid cells support the concept of a splico-stat.

Authors:  Marcel Kramer; Klaus Huse; Uwe Menzel; Oliver Backhaus; Philip Rosenstiel; Stefan Schreiber; Jochen Hampe; Matthias Platzer
Journal:  Genetics       Date:  2011-01-10       Impact factor: 4.562

6.  Quantification of G protein Gaalphas subunit splice variants in different human tissues and cells using pyrosequencing.

Authors:  Ulrich H Frey; Holger Nückel; Dobromir Dobrev; Iris Manthey; I E Sandalcioglu; Andreas Eisenhardt; Karl Worm; Hans Hauner; Winfried Siffert
Journal:  Gene Expr       Date:  2005

7.  The metastasis efficiency modifier ribosomal RNA processing 1 homolog B (RRP1B) is a chromatin-associated factor.

Authors:  Nigel P S Crawford; Hailiu Yang; Katherine R Mattaini; Kent W Hunter
Journal:  J Biol Chem       Date:  2009-08-26       Impact factor: 5.157

8.  Transposable elements in disease-associated cryptic exons.

Authors:  Igor Vorechovsky
Journal:  Hum Genet       Date:  2009-10-10       Impact factor: 4.132

9.  Alternative splicing in exon 9 of glucocorticoid receptor pre-mRNA is regulated by SRp40.

Authors:  Xue-Bo Yan; Chen-Hong Tang; Yan Huang; Hui Fang; Zhi-Qiang Yu; Li-Min Wu; Rong-Yu Liu
Journal:  Mol Biol Rep       Date:  2009-04-03       Impact factor: 2.316

10.  Reduction in TRPC4 expression specifically attenuates G-protein coupled receptor-stimulated increases in intracellular calcium in human myometrial cells.

Authors:  Aida Ulloa; Albert L Gonzales; Miao Zhong; Yoon-Sun Kim; Jeremy Cantlon; Colin Clay; Chun-Ying Ku; Scott Earley; Barbara M Sanborn
Journal:  Cell Calcium       Date:  2009-06-11       Impact factor: 6.817

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