Literature DB >> 11825285

Developing a test collection for biomedical word sense disambiguation.

M Weeber1, J G Mork, A R Aronson.   

Abstract

Ambiguity, the phenomenon that a word has more than one sense, poses difficulties for many current Natural Language Processing (NLP) systems. Algorithms that assist in the resolution of these ambiguities, i.e. which make unambiguous a word, or more generally, a text string, will boost performance of these systems. To test such techniques in the biomedical language domain, we have developed a Word Sense Disambiguation (WSD) test collection that comprises 5,000 unambiguous instances for 50 ambiguous UMLS Metathesaurus strings.

Entities:  

Mesh:

Year:  2001        PMID: 11825285      PMCID: PMC2243574     

Source DB:  PubMed          Journal:  Proc AMIA Symp        ISSN: 1531-605X


  7 in total

1.  UMLS concept indexing for production databases: a feasibility study.

Authors:  P Nadkarni; R Chen; C Brandt
Journal:  J Am Med Inform Assoc       Date:  2001 Jan-Feb       Impact factor: 4.497

2.  The NLM Indexing Initiative.

Authors:  A R Aronson; O Bodenreider; H F Chang; S M Humphrey; J G Mork; S J Nelson; T C Rindflesch; W J Wilbur
Journal:  Proc AMIA Symp       Date:  2000

3.  A broad-coverage natural language processing system.

Authors:  C Friedman
Journal:  Proc AMIA Symp       Date:  2000

4.  Text-based discovery in biomedicine: the architecture of the DAD-system.

Authors:  M Weeber; H Klein; A R Aronson; J G Mork; L T de Jong-van den Berg; R Vos
Journal:  Proc AMIA Symp       Date:  2000

5.  The effect of textual variation on concept based information retrieval.

Authors:  A R Aronson
Journal:  Proc AMIA Annu Fall Symp       Date:  1996

Review 6.  Migraine and magnesium: eleven neglected connections.

Authors:  D R Swanson
Journal:  Perspect Biol Med       Date:  1988       Impact factor: 1.416

7.  Ambiguity resolution while mapping free text to the UMLS Metathesaurus.

Authors:  T C Rindflesch; A R Aronson
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1994
  7 in total
  32 in total

1.  Automatic resolution of ambiguous terms based on machine learning and conceptual relations in the UMLS.

Authors:  Hongfang Liu; Stephen B Johnson; Carol Friedman
Journal:  J Am Med Inform Assoc       Date:  2002 Nov-Dec       Impact factor: 4.497

2.  A multi-aspect comparison study of supervised word sense disambiguation.

Authors:  Hongfang Liu; Virginia Teller; Carol Friedman
Journal:  J Am Med Inform Assoc       Date:  2004-04-02       Impact factor: 4.497

3.  Text mining neuroscience journal articles to populate neuroscience databases.

Authors:  Chiquito J Crasto; Luis N Marenco; Michele Migliore; Buqing Mao; Prakash M Nadkarni; Perry Miller; Gordon M Shepherd
Journal:  Neuroinformatics       Date:  2003

4.  An overview of MetaMap: historical perspective and recent advances.

Authors:  Alan R Aronson; François-Michel Lang
Journal:  J Am Med Inform Assoc       Date:  2010 May-Jun       Impact factor: 4.497

5.  Generating quality word sense disambiguation test sets based on MeSH indexing.

Authors:  Jung-Wei Fan; Carol Friedman
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

6.  Using a statistical natural language Parser augmented with the UMLS specialist lexicon to assign SNOMED CT codes to anatomic sites and pathologic diagnoses in full text pathology reports.

Authors:  Henry J Lowe; Yang Huang; Donald P Regula
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

7.  Using UMLS Concept Unique Identifiers (CUIs) for word sense disambiguation in the biomedical domain.

Authors:  Bridget T McInnes; Ted Pedersen; John Carlis
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

8.  Word sense disambiguation via semantic type classification.

Authors:  Jung-Wei Fan; Carol Friedman
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

Review 9.  Natural language processing: an introduction.

Authors:  Prakash M Nadkarni; Lucila Ohno-Machado; Wendy W Chapman
Journal:  J Am Med Inform Assoc       Date:  2011 Sep-Oct       Impact factor: 4.497

10.  Knowledge-Based Biomedical Word Sense Disambiguation with Neural Concept Embeddings

Authors:  Akm Sabbir; Antonio Jimeno-Yepes; Ramakanth Kavuluru
Journal:  Proc IEEE Int Symp Bioinformatics Bioeng       Date:  2018-01-11
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.