Literature DB >> 11821858

Engineering polydactyl zinc-finger transcription factors.

Roger R Beerli1, Carlos F Barbas.   

Abstract

The availability of rapid and robust methods for controlling gene function is of prime importance not only for assigning functions to newly discovered genes, but also for therapeutic intervention. Traditionally, gene function has been probed by often-laborious methods that either increase the level of a gene product or decrease it. Advances now make it possible to rapidly produce zinc-finger proteins capable of recognizing virtually any 18 bp stretch of DNA--a sequence long enough to specify a unique address in any genome. The attachment of functional domains also allows the design of tailor-made transcription factors for specific genes. Recent studies demonstrate that artificial transcription factors are capable of controlling the expression of endogenous genes in their native chromosomal context with a high degree of specificity in both animals and plants. Dominant regulatory control of expression of any endogenous gene can be achieved rapidly and can be also placed under chemical control. A wide range of potential applications is now within reach.

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Year:  2002        PMID: 11821858     DOI: 10.1038/nbt0202-135

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  155 in total

Review 1.  Therapeutic modulation of endogenous gene function by agents with designed DNA-sequence specificities.

Authors:  Taco G Uil; Hidde J Haisma; Marianne G Rots
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

2.  Highly specific zinc finger proteins obtained by directed domain shuffling and cell-based selection.

Authors:  Jessica A Hurt; Stacey A Thibodeau; Andrew S Hirsh; Carl O Pabo; J Keith Joung
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-03       Impact factor: 11.205

3.  Repression of the HIV-1 5' LTR promoter and inhibition of HIV-1 replication by using engineered zinc-finger transcription factors.

Authors:  Lindsey Reynolds; Christopher Ullman; Michael Moore; Mark Isalan; Michelle J West; Paul Clapham; Aaron Klug; Yen Choo
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-06       Impact factor: 11.205

4.  Regulation of transgene expression in plants with polydactyl zinc finger transcription factors.

Authors:  M Isabel Ordiz; Carlos F Barbas; Roger N Beachy
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

5.  In vitro selection of restriction endonucleases by in vitro compartmentalization.

Authors:  Nobuhide Doi; Shin Kumadaki; Yuko Oishi; Nobutaka Matsumura; Hiroshi Yanagawa
Journal:  Nucleic Acids Res       Date:  2004-07-06       Impact factor: 16.971

6.  The maize ID1 flowering time regulator is a zinc finger protein with novel DNA binding properties.

Authors:  Akiko Kozaki; Sarah Hake; Joseph Colasanti
Journal:  Nucleic Acids Res       Date:  2004-03-12       Impact factor: 16.971

7.  Re-programming DNA-binding specificity in zinc finger proteins for targeting unique address in a genome.

Authors:  Abhinav Grover; Akshay Pande; Krishna Choudhary; Kriti Gupta; Durai Sundar
Journal:  Syst Synth Biol       Date:  2011-02-19

8.  Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site.

Authors:  Cary T Valley; Douglas F Porter; Chen Qiu; Zachary T Campbell; Traci M Tanaka Hall; Marvin Wickens
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-30       Impact factor: 11.205

9.  Design of single-stranded nucleic acid binding peptides based on nucleocapsid CCHC-box zinc-binding domains.

Authors:  Anthony L Guerrerio; Jeremy M Berg
Journal:  J Am Chem Soc       Date:  2010-07-21       Impact factor: 15.419

10.  Zinc finger protein 451 is a novel Smad corepressor in transforming growth factor-β signaling.

Authors:  Yili Feng; Hongxing Wu; Yongxian Xu; Zhengmao Zhang; Ting Liu; Xia Lin; Xin-Hua Feng
Journal:  J Biol Chem       Date:  2013-12-09       Impact factor: 5.157

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