Literature DB >> 11814840

Cloning, isolation and characterization of the Thermotoga maritima KDPG aldolase.

Jennifer S Griffiths1, Nathan J Wymer, Eugenia Njolito, S Niranjanakumari, Carol A Fierke, Eric J Toone.   

Abstract

The Thermotoga maritima aldolase gene has been cloned into a T7 expression vector and overexpressed in Escherichia coli. The preparation yields 470 UL(-1) of enzyme at a specific activity of 9.4 U mg(-1). During retroaldol cleavage of KDPG, the enzyme shows a k(cat) that decreases with decreasing temperature. A more than offsetting decrease in K(m) yields an enzyme that is more efficient at 40 degrees C than at 70 degrees C. The substrate specificity of the enzyme was evaluated in the synthetic direction with a range of aldehyde substrates. Although the protein shows considerable structural homology to KDPG aldolases from mesophilic sources, significant differences in substrate specificity exist. A preparative scale reaction between 2-pyridine carboxaldehyde and pyruvate provided product of the same absolute configuration as mesophilic enzymes, but with diminished stereoselectivity.

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Year:  2002        PMID: 11814840     DOI: 10.1016/s0968-0896(01)00307-8

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  16 in total

Review 1.  The unique features of glycolytic pathways in Archaea.

Authors:  Corné H Verhees; Servé W M Kengen; Judith E Tuininga; Gerrit J Schut; Michael W W Adams; Willem M De Vos; John Van Der Oost
Journal:  Biochem J       Date:  2003-10-15       Impact factor: 3.857

2.  Directed evolution of a pyruvate aldolase to recognize a long chain acyl substrate.

Authors:  Manoj Cheriyan; Matthew J Walters; Brian D Kang; Laura L Anzaldi; Eric J Toone; Carol A Fierke
Journal:  Bioorg Med Chem       Date:  2011-08-30       Impact factor: 3.641

3.  Mutagenesis of the phosphate-binding pocket of KDPG aldolase enhances selectivity for hydrophobic substrates.

Authors:  Manoj Cheriyan; Eric J Toone; Carol A Fierke
Journal:  Protein Sci       Date:  2007-11       Impact factor: 6.725

4.  Characterization of a highly flexible self-assembling protein system designed to form nanocages.

Authors:  Dustin P Patterson; Min Su; Titus M Franzmann; Aaron Sciore; Georgios Skiniotis; E Neil G Marsh
Journal:  Protein Sci       Date:  2013-12-16       Impact factor: 6.725

5.  A Tunable Microfluidic Device Enables Cargo Encapsulation by Cell- or Organelle-Sized Lipid Vesicles Comprising Asymmetric Lipid Bilayers.

Authors:  Valentin Romanov; John McCullough; Bruce K Gale; Adam Frost
Journal:  Adv Biosyst       Date:  2019-05-27

6.  The semi-phosphorylative Entner-Doudoroff pathway in hyperthermophilic archaea: a re-evaluation.

Authors:  Hatim Ahmed; Thijs J G Ettema; Britta Tjaden; Ans C M Geerling; John van der Oost; Bettina Siebers
Journal:  Biochem J       Date:  2005-09-01       Impact factor: 3.857

7.  Evaluation of a symmetry-based strategy for assembling protein complexes.

Authors:  Dustin P Patterson; Ankur M Desai; Mark M Banaszak Holl; E Neil G Marsh
Journal:  RSC Adv       Date:  2011-10-21       Impact factor: 3.361

8.  Characterization and crystal structure of Escherichia coli KDPGal aldolase.

Authors:  Matthew J Walters; Velupillai Srikannathasan; Andrew R McEwan; James H Naismith; Carol A Fierke; Eric J Toone
Journal:  Bioorg Med Chem       Date:  2007-10-18       Impact factor: 3.641

9.  Tagaturonate-fructuronate epimerase UxaE, a novel enzyme in the hexuronate catabolic network in Thermotoga maritima.

Authors:  Irina A Rodionova; David A Scott; Nick V Grishin; Andrei L Osterman; Dmitry A Rodionov
Journal:  Environ Microbiol       Date:  2012-08-23       Impact factor: 5.491

10.  Carbohydrate metabolism and carbon fixation in Roseobacter denitrificans OCh114.

Authors:  Kuo-Hsiang Tang; Xueyang Feng; Yinjie J Tang; Robert E Blankenship
Journal:  PLoS One       Date:  2009-10-01       Impact factor: 3.240

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