Literature DB >> 12897055

Sequence-independent DNA binding and replication initiation by the human origin recognition complex.

Sanjay Vashee1, Christin Cvetic, Wenyan Lu, Pamela Simancek, Thomas J Kelly, Johannes C Walter.   

Abstract

We report that a highly purified human origin recognition complex (HsORC) has intrinsic DNA-binding activity, and that this activity is modestly stimulated by ATP. HsORC binds preferentially to synthetic AT-rich polydeoxynucleotides, but does not effectively discriminate between natural DNA fragments that contain known human origins and control fragments. The complex fully restores DNA replication to ORC-depleted Xenopus egg extracts, providing strong evidence for its initiator function. Strikingly, HsORC stimulates initiation from any DNA sequence, and it does not preferentially replicate DNA containing human origin sequences. These data provide a biochemical explanation for the observation that in metazoans, initiation of DNA replication often occurs in a seemingly random pattern, and they have important implications for the nature of human origins of DNA replication.

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Year:  2003        PMID: 12897055      PMCID: PMC196240          DOI: 10.1101/gad.1084203

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  72 in total

1.  A broad replication origin of Drosophila melanogaster, oriDalpha, consists of AT-rich multiple discrete initiation sites.

Authors:  S Ina; T Sasaki; Y Yokota; T Shinomiya
Journal:  Chromosoma       Date:  2001-02       Impact factor: 4.316

2.  Stability, chromatin association and functional activity of mammalian pre-replication complex proteins during the cell cycle.

Authors:  Y Okuno; A J McNairn; N den Elzen; J Pines; D M Gilbert
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

3.  Assembly of the human origin recognition complex.

Authors:  S Vashee; P Simancek; M D Challberg; T J Kelly
Journal:  J Biol Chem       Date:  2001-04-25       Impact factor: 5.157

4.  ORC localization in Drosophila follicle cells and the effects of mutations in dE2F and dDP.

Authors:  I Royzman; R J Austin; G Bosco; S P Bell; T L Orr-Weaver
Journal:  Genes Dev       Date:  1999-04-01       Impact factor: 11.361

5.  Architecture of the human origin recognition complex.

Authors:  S K Dhar; L Delmolino; A Dutta
Journal:  J Biol Chem       Date:  2001-06-06       Impact factor: 5.157

6.  Replication from oriP of Epstein-Barr virus requires human ORC and is inhibited by geminin.

Authors:  S K Dhar; K Yoshida; Y Machida; P Khaira; B Chaudhuri; J A Wohlschlegel; M Leffak; J Yates; A Dutta
Journal:  Cell       Date:  2001-08-10       Impact factor: 41.582

7.  Human origin recognition complex binds to the region of the latent origin of DNA replication of Epstein-Barr virus.

Authors:  A Schepers; M Ritzi; K Bousset; E Kremmer; J L Yates; J Harwood; J F Diffley; W Hammerschmidt
Journal:  EMBO J       Date:  2001-08-15       Impact factor: 11.598

8.  Regulation of replicon size in Xenopus egg extracts.

Authors:  J Walter; J W Newport
Journal:  Science       Date:  1997-02-14       Impact factor: 47.728

9.  The Xenopus origin recognition complex is essential for DNA replication and MCM binding to chromatin.

Authors:  P Romanowski; M A Madine; A Rowles; J J Blow; R A Laskey
Journal:  Curr Biol       Date:  1996-11-01       Impact factor: 10.834

10.  Changes in association of the Xenopus origin recognition complex with chromatin on licensing of replication origins.

Authors:  A Rowles; S Tada; J J Blow
Journal:  J Cell Sci       Date:  1999-06       Impact factor: 5.285

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  152 in total

1.  DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding.

Authors:  Dirk Remus; Eileen L Beall; Michael R Botchan
Journal:  EMBO J       Date:  2004-02-05       Impact factor: 11.598

2.  An episomal mammalian replicon: sequence-independent binding of the origin recognition complex.

Authors:  Daniel Schaarschmidt; Jens Baltin; Isa M Stehle; Hans J Lipps; Rolf Knippers
Journal:  EMBO J       Date:  2003-12-11       Impact factor: 11.598

3.  Nuclear scaffold/matrix attached region modules linked to a transcription unit are sufficient for replication and maintenance of a mammalian episome.

Authors:  Andreas C W Jenke; Isa M Stehle; Frank Herrmann; Tobias Eisenberger; Armin Baiker; Jürgen Bode; Frank O Fackelmayer; Hans J Lipps
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-22       Impact factor: 11.205

4.  The amino terminus of Epstein-Barr Virus (EBV) nuclear antigen 1 contains AT hooks that facilitate the replication and partitioning of latent EBV genomes by tethering them to cellular chromosomes.

Authors:  John Sears; Maki Ujihara; Samantha Wong; Christopher Ott; Jaap Middeldorp; Ashok Aiyar
Journal:  J Virol       Date:  2004-11       Impact factor: 5.103

Review 5.  In search of the holy replicator.

Authors:  David M Gilbert
Journal:  Nat Rev Mol Cell Biol       Date:  2004-10       Impact factor: 94.444

6.  Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs.

Authors:  Emilie Besnard; Amélie Babled; Laure Lapasset; Ollivier Milhavet; Hugues Parrinello; Christelle Dantec; Jean-Michel Marin; Jean-Marc Lemaitre
Journal:  Nat Struct Mol Biol       Date:  2012-07-01       Impact factor: 15.369

Review 7.  Regulation of DNA replication by chromatin structures: accessibility and recruitment.

Authors:  Makoto T Hayashi; Hisao Masukata
Journal:  Chromosoma       Date:  2010-08-03       Impact factor: 4.316

8.  Chromatin signatures of the Drosophila replication program.

Authors:  Matthew L Eaton; Joseph A Prinz; Heather K MacAlpine; George Tretyakov; Peter V Kharchenko; David M MacAlpine
Journal:  Genome Res       Date:  2010-12-22       Impact factor: 9.043

Review 9.  Eukaryotic DNA replication origins: many choices for appropriate answers.

Authors:  Marcel Méchali
Journal:  Nat Rev Mol Cell Biol       Date:  2010-10       Impact factor: 94.444

10.  Direct binding of DNA by tumor suppressor menin.

Authors:  Ping La; Albert C Silva; Zhaoyuan Hou; Haoren Wang; Robert W Schnepp; Nieng Yan; Yigong Shi; Xianxin Hua
Journal:  J Biol Chem       Date:  2004-08-24       Impact factor: 5.157

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