Literature DB >> 11800992

Excited-state lifetimes of far-infrared collective modes in proteins.

Aihua Xie1, Alexander F G van der Meer, Robert H Austin.   

Abstract

Vibrational excitations of low frequency collective modes are essential for functionally important conformational transitions in proteins. Here we report the first direct measurement on the lifetime of vibrational excitations of the collective modes at 87 microm (115 cm(-1)) in bacteriorhodopsin, a transmembrane protein. The data show that these modes have extremely long lifetime of vibrational excitations, over 500 ps, accommodating 1500 vibrations. We suggest that there is a connection between this relatively slow anharmonic relaxation rate of approximately 10(9) sec(-1) and the similar observed rate of conformational transitions in proteins, which require multilevel vibrational excitations.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11800992     DOI: 10.1103/PhysRevLett.88.018102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  19 in total

1.  Protein flexibility and conformational state: a comparison of collective vibrational modes of wild-type and D96N bacteriorhodopsin.

Authors:  S E Whitmire; D Wolpert; A G Markelz; J R Hillebrecht; J Galan; R R Birge
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

2.  Torsional vibrational modes of tryptophan studied by terahertz time-domain spectroscopy.

Authors:  B Yu; F Zeng; Y Yang; Q Xing; A Chechin; X Xin; I Zeylikovich; R R Alfano
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

3.  A Biophysical Perspective on Enzyme Catalysis.

Authors:  Pratul K Agarwal
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

4.  Vibrational energy relaxation in proteins.

Authors:  Hiroshi Fujisaki; John E Straub
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-14       Impact factor: 11.205

5.  Role of intramolecular vibrations in long-range electron transfer between pheophytin and ubiquinone in bacterial photosynthetic reaction centers.

Authors:  Raffaele Borrelli; Mariangela Di Donato; Andrea Peluso
Journal:  Biophys J       Date:  2005-05-13       Impact factor: 4.033

6.  High-resolution waveguide THz spectroscopy of biological molecules.

Authors:  N Laman; S Sree Harsha; D Grischkowsky; Joseph S Melinger
Journal:  Biophys J       Date:  2007-10-12       Impact factor: 4.033

7.  Low-frequency vibrational modes and infrared absorbance of red, blue and green opsin.

Authors:  Saravana Prakash Thirumuruganandham; Herbert M Urbassek
Journal:  J Mol Model       Date:  2009-02-03       Impact factor: 1.810

8.  Tilting after Dutch windmills: probably no long-lived Davydov solitons in proteins.

Authors:  Robert H Austin; Aihua Xie; Dan Fu; Warren W Warren; Britta Redlich; Lex van der Meer
Journal:  J Biol Phys       Date:  2009-02-11       Impact factor: 1.365

Review 9.  Radiofrequency and microwave interactions between biomolecular systems.

Authors:  Ondřej Kučera; Michal Cifra
Journal:  J Biol Phys       Date:  2015-07-15       Impact factor: 1.365

10.  Moving in the Right Direction: Protein Vibrations Steering Function.

Authors:  Katherine A Niessen; Mengyang Xu; Alessandro Paciaroni; Andrea Orecchini; Edward H Snell; Andrea G Markelz
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.