Literature DB >> 17933879

High-resolution waveguide THz spectroscopy of biological molecules.

N Laman1, S Sree Harsha, D Grischkowsky, Joseph S Melinger.   

Abstract

Low-frequency vibrational modes of biological molecules consist of intramolecular modes, which are dependent on the molecule as a whole, as well as intermolecular modes, which arise from hydrogen-bonding interactions and van der Waals forces. Vibrational modes thus contain important information about conformation dynamics of biological molecules, and can also be used for identification purposes. However, conventional Fourier transform infrared spectroscopy and terahertz time-domain spectroscopy (THz-TDS) often result in broad, overlapping features that are difficult to distinguish. The technique of waveguide THz-TDS has been recently developed, resulting in sharper features. For this technique, an ordered polycrystalline film of the molecule is formed on a metal sample plate. This plate is incorporated into a metal parallel-plate waveguide and probed via waveguide THz-TDS. The planar order of the film reduces the inhomogeneous broadening, and cooling of the samples to 77K reduces the homogenous broadening. This combination results in the line-narrowing of THz vibrational modes, in some cases to an unprecedented degree. Here, this technique has been demonstrated with seven small biological molecules, thymine, deoxycytidine, adenosine, D-glucose, tryptophan, glycine, and L-alanine. The successful demonstration of this technique shows the possibilities and promise for future studies of internal vibrational modes of large biological molecules.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17933879      PMCID: PMC2186241          DOI: 10.1529/biophysj.107.113647

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  26 in total

1.  THz time domain spectroscopy of biomolecular conformational modes.

Authors:  Andrea Markelz; Scott Whitmire; Jay Hillebrecht; Robert Birge
Journal:  Phys Med Biol       Date:  2002-11-07       Impact factor: 3.609

2.  Protein flexibility and conformational state: a comparison of collective vibrational modes of wild-type and D96N bacteriorhodopsin.

Authors:  S E Whitmire; D Wolpert; A G Markelz; J R Hillebrecht; J Galan; R R Birge
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

3.  Direct determination of vibrational density of states change on ligand binding to a protein.

Authors:  Erika Balog; Torsten Becker; Martin Oettl; Ruep Lechner; Roy Daniel; John Finney; Jeremy C Smith
Journal:  Phys Rev Lett       Date:  2004-07-09       Impact factor: 9.161

4.  Torsional vibrational modes of tryptophan studied by terahertz time-domain spectroscopy.

Authors:  B Yu; F Zeng; Y Yang; Q Xing; A Chechin; X Xin; I Zeylikovich; R R Alfano
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

5.  Far-infrared perturbation of reaction rates in myoglobin at low temperatures.

Authors: 
Journal:  Phys Rev Lett       Date:  1989-04-17       Impact factor: 9.161

6.  Using terahertz pulsed spectroscopy to quantify pharmaceutical polymorphism and crystallinity.

Authors:  Clare J Strachan; Philip F Taday; David A Newnham; Keith C Gordon; J Axel Zeitler; Michael Pepper; Thomas Rades
Journal:  J Pharm Sci       Date:  2005-04       Impact factor: 3.534

7.  A DNA self-assembled monolayer for the specific attachment of unmodified double- or single-stranded DNA.

Authors:  C Bamdad
Journal:  Biophys J       Date:  1998-10       Impact factor: 4.033

8.  Investigation of far-infrared vibrational modes in polynucleotides.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1987-05-01

9.  Vibrationally coherent photochemistry in the femtosecond primary event of vision.

Authors:  Q Wang; R W Schoenlein; L A Peteanu; R A Mathies; C V Shank
Journal:  Science       Date:  1994-10-21       Impact factor: 47.728

10.  Far-infrared vibrational modes of DNA components studied by terahertz time-domain spectroscopy.

Authors:  B M Fischer; M Walther; P Uhd Jepsen
Journal:  Phys Med Biol       Date:  2002-11-07       Impact factor: 3.609

View more
  9 in total

1.  Terahertz spectroscopy of brain tissue from a mouse model of Alzheimer's disease.

Authors:  Lingyan Shi; Pavel Shumyatsky; Adrián Rodríguez-Contreras; Robert Alfano
Journal:  J Biomed Opt       Date:  2016-01       Impact factor: 3.170

2.  Detection of trace glucose on the surface of a semipermeable membrane using a fluorescently labeled glucose-binding protein: a promising approach to noninvasive glucose monitoring.

Authors:  Xudong Ge; Govind Rao; Yordan Kostov; Sunsanee Kanjananimmanont; Rose M Viscardi; Hyung Woo; Leah Tolosa
Journal:  J Diabetes Sci Technol       Date:  2013-01-01

3.  Analysis of dermal composite conditions using collagen absorption characteristics in the THz range.

Authors:  Maya Mizuno; Noriko Yaekashiwa; Soichi Watanabe
Journal:  Biomed Opt Express       Date:  2018-04-20       Impact factor: 3.732

4.  Long-range DNA-water interactions.

Authors:  Abhishek K Singh; Chengyuan Wen; Shengfeng Cheng; Nguyen Q Vinh
Journal:  Biophys J       Date:  2021-10-21       Impact factor: 4.033

5.  Qualitative analysis of collective mode frequency shifts in L-alanine using terahertz spectroscopy.

Authors:  Anita R Taulbee; Justin A Heuser; Wolfgang U Spendel; Gilbert E Pacey
Journal:  Anal Chem       Date:  2009-04-01       Impact factor: 6.986

6.  Rapid and precise determination of zero-field splittings by terahertz time-domain electron paramagnetic resonance spectroscopy.

Authors:  Jian Lu; I Ozge Ozel; Carina A Belvin; Xian Li; Grigorii Skorupskii; Lei Sun; Benjamin K Ofori-Okai; Mircea Dincă; Nuh Gedik; Keith A Nelson
Journal:  Chem Sci       Date:  2017-04-19       Impact factor: 9.825

7.  Enhanced terahertz fingerprint detection with ultrahigh sensitivity using the cavity defect modes.

Authors:  Xiaomei Shi; Zhanghua Han
Journal:  Sci Rep       Date:  2017-10-13       Impact factor: 4.379

8.  Behavioral Effect of Terahertz Waves in C57BL/6 Mice.

Authors:  Miao Qi; Rong Liu; Bing Li; Shuai Wang; Runze Fan; Xinyi Zhao; Dehui Xu
Journal:  Biosensors (Basel)       Date:  2022-01-28

9.  A new principle of pulse detection based on terahertz wave plethysmography.

Authors:  Yu Rong; Panagiotis C Theofanopoulos; Georgios C Trichopoulos; Daniel W Bliss
Journal:  Sci Rep       Date:  2022-04-15       Impact factor: 4.379

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.