Literature DB >> 11752672

RNA interference of gene expression (RNAi) in cultured Drosophila cells.

C A Worby1, N Simonson-Leff, J E Dixon.   

Abstract

RNA interference (RNAi) can be used to silence genes in a number of taxa, including plants, nematodes, protozoans, flies, and mammals represented by mouse embryos and cultured mammalian cells. To investigate signal transduction pathways, we used RNAi on Drosophila-cultured cells, which affords the opportunity to study protein function in a simple, well-defined cell culture system. Furthermore, the results obtained from experiments performed on cultured cells can be confirmed and extended in the whole organism, which, in the case of Drosophila, is also RNAi responsive. RNAi takes advantage of the unique ability of double-stranded RNA (dsRNA) molecules to induce posttranscriptional gene silencing in a highly specific manner. This silencing is efficacious and long-lived, as it is passed to subsequent generations in insect cell culture. To date, all Drosophila cell lines tested (S2, KC, BG2-C6, and Shi) respond to dsRNAs by ablating expression of the target protein. Furthermore, all dsRNAs tested (more than 15) have been effective at silencing the target gene. Drosophila cell cultures are simple, easily manipulated model systems that will facilitate loss-of-function studies applicable to a wide variety of questions.

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Year:  2001        PMID: 11752672     DOI: 10.1126/stke.2001.95.pl1

Source DB:  PubMed          Journal:  Sci STKE        ISSN: 1525-8882


  51 in total

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Journal:  Chromosoma       Date:  2011-11-10       Impact factor: 4.316

2.  Remodelers organize cellular chromatin by counteracting intrinsic histone-DNA sequence preferences in a class-specific manner.

Authors:  Yuri M Moshkin; Gillian E Chalkley; Tsung Wai Kan; B Ashok Reddy; Zeliha Ozgur; Wilfred F J van Ijcken; Dick H W Dekkers; Jeroen A Demmers; Andrew A Travers; C Peter Verrijzer
Journal:  Mol Cell Biol       Date:  2011-11-28       Impact factor: 4.272

3.  Coop functions as a corepressor of Pangolin and antagonizes Wingless signaling.

Authors:  Haiyun Song; Sandra Goetze; Johannes Bischof; Chloe Spichiger-Haeusermann; Marco Kuster; Erich Brunner; Konrad Basler
Journal:  Genes Dev       Date:  2010-05       Impact factor: 11.361

4.  Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin.

Authors:  Nicole C Riddle; Aki Minoda; Peter V Kharchenko; Artyom A Alekseyenko; Yuri B Schwartz; Michael Y Tolstorukov; Andrey A Gorchakov; Jacob D Jaffe; Cameron Kennedy; Daniela Linder-Basso; Sally E Peach; Gregory Shanower; Haiyan Zheng; Mitzi I Kuroda; Vincenzo Pirrotta; Peter J Park; Sarah C R Elgin; Gary H Karpen
Journal:  Genome Res       Date:  2010-12-22       Impact factor: 9.043

5.  Identification of chemosensory receptor genes in Manduca sexta and knockdown by RNA interference.

Authors:  Natalie Howlett; Katherine L Dauber; Aditi Shukla; Brian Morton; John I Glendinning; Elyssa Brent; Caroline Gleason; Fahmida Islam; Denisse Izquierdo; Sweta Sanghavi; Anika Afroz; Aanam Aslam; Marissa Barbaro; Rebekah Blutstein; Margarita Borovka; Brianna Desire; Ayala Elikhis; Qing Fan; Katherine Hoffman; Amy Huang; Dominique Keefe; Sarah Lopatin; Samara Miller; Priyata Patel; Danielle Rizzini; Alyssa Robinson; Karimah Rokins; Aneta Turlik; Jennifer H Mansfield
Journal:  BMC Genomics       Date:  2012-05-30       Impact factor: 3.969

6.  Use of RNA interference to dissect the roles of trans-acting factors in alternative pre-mRNA splicing.

Authors:  Jung W Park; Brenton R Graveley
Journal:  Methods       Date:  2005-12       Impact factor: 3.608

7.  Identification and characterization of a Penaeus monodon lymphoid cell-expressed receptor for the yellow head virus.

Authors:  Wanchai Assavalapsakul; Duncan R Smith; Sakol Panyim
Journal:  J Virol       Date:  2006-01       Impact factor: 5.103

8.  TSC1/TSC2 and Rheb have different effects on TORC1 and TORC2 activity.

Authors:  Qian Yang; Ken Inoki; Eunjung Kim; Kun-Liang Guan
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-20       Impact factor: 11.205

9.  Distinct mechanisms of E2F regulation by Drosophila RBF1 and RBF2.

Authors:  Olivier Stevaux; Dessislava Dimova; Maxim V Frolov; Barbie Taylor-Harding; Erick Morris; Nicholas Dyson
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

10.  Drosophila O-GlcNAcase Deletion Globally Perturbs Chromatin O-GlcNAcylation.

Authors:  Ilhan Akan; Dona C Love; Katryn R Harwood; Michelle R Bond; John A Hanover
Journal:  J Biol Chem       Date:  2016-03-08       Impact factor: 5.157

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