Literature DB >> 11751603

An exonic splicing enhancer in human IGF-I pre-mRNA mediates recognition of alternative exon 5 by the serine-arginine protein splicing factor-2/alternative splicing factor.

Philip J Smith1, Emma L Spurrell, John Coakley, Charles J Hinds, Richard J M Ross, Adrian R Krainer, Shern L Chew.   

Abstract

The human IGF-I gene has six exons, four of which are alternatively spliced. Variations in splicing involving exon 5 may occur, depending on the tissue type and hormonal environment. To study the regulation of splicing to IGF-I exon 5, we established an in vitro splicing assay, using a model pre-mRNA containing IGF-I exons 4 and 5 and part of the intervening intron. Using a series of deletion mutants, we identified an 18-nucleotide purine-rich splicing enhancer in exon 5 that increases the splicing efficiency of the upstream intron from 6 to 35%. We show that the serine-arginine protein splicing factor-2/alternative splicing factor specifically promotes splicing in cultured cells and in vitro and is recruited to the spliceosome in an enhancer-specific manner. Our findings are consistent with a role for splicing factor-2/alternative splicing factor in the regulation of splicing of IGF-I alternative exon 5 via a purine-rich exonic splicing enhancer.

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Year:  2002        PMID: 11751603     DOI: 10.1210/endo.143.1.8598

Source DB:  PubMed          Journal:  Endocrinology        ISSN: 0013-7227            Impact factor:   4.736


  13 in total

Review 1.  Regulation of alternative RNA splicing by exon definition and exon sequences in viral and mammalian gene expression.

Authors:  Zhi-Ming Zheng
Journal:  J Biomed Sci       Date:  2004 May-Jun       Impact factor: 8.410

2.  Epigenetics of programmed obesity: alteration in IUGR rat hepatic IGF1 mRNA expression and histone structure in rapid vs. delayed postnatal catch-up growth.

Authors:  Darran N Tosh; Qi Fu; Christopher W Callaway; Robert A McKnight; Isabella C McMillen; Michael G Ross; Robert H Lane; Mina Desai
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2010-09-02       Impact factor: 4.052

3.  hnRNP H and hnRNP F complex with Fox2 to silence fibroblast growth factor receptor 2 exon IIIc.

Authors:  David M Mauger; Carolina Lin; Mariano A Garcia-Blanco
Journal:  Mol Cell Biol       Date:  2008-06-23       Impact factor: 4.272

Review 4.  Molecular genetics of human growth hormone, insulin-like growth factors and their pathways in common disease.

Authors:  Santiago Rodriguez; Tom R Gaunt; Ian N M Day
Journal:  Hum Genet       Date:  2007-05-30       Impact factor: 4.132

5.  ESEfinder: A web resource to identify exonic splicing enhancers.

Authors:  Luca Cartegni; Jinhua Wang; Zhengwei Zhu; Michael Q Zhang; Adrian R Krainer
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

6.  Isolated pseudo-RNA-recognition motifs of SR proteins can regulate splicing using a noncanonical mode of RNA recognition.

Authors:  Antoine Cléry; Rahul Sinha; Olga Anczuków; Anna Corrionero; Ahmed Moursy; Gerrit M Daubner; Juan Valcárcel; Adrian R Krainer; Frédéric H-T Allain
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-08       Impact factor: 11.205

Review 7.  Posttranscriptional regulation of insulin family ligands and receptors.

Authors:  Amaresh C Panda; Ioannis Grammatikakis; Je-Hyun Yoon; Kotb Abdelmohsen
Journal:  Int J Mol Sci       Date:  2013-09-18       Impact factor: 5.923

8.  The Regulation of IGF-1 Gene Transcription and Splicing during Development and Aging.

Authors:  A M Oberbauer
Journal:  Front Endocrinol (Lausanne)       Date:  2013-03-26       Impact factor: 5.555

Review 9.  Normal levels of serum IGF-I: determinants and validity of current reference ranges.

Authors:  G Brabant; H Wallaschofski
Journal:  Pituitary       Date:  2007       Impact factor: 3.599

10.  Splice variants of the forkhead box protein AFX exhibit dominant negative activity and inhibit AFXalpha-mediated tumor cell apoptosis.

Authors:  Eun Jig Lee; Jeong Mo Kim; Mi Kyung Lee; J Larry Jameson
Journal:  PLoS One       Date:  2008-07-23       Impact factor: 3.240

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