Literature DB >> 11751307

Thermodynamic view of activation energies of proton transfer in various gramicidin A channels.

Anatoly Chernyshev1, Samuel Cukierman.   

Abstract

The temperature dependencies (range: 5-45 degrees C) of single-channel proton conductances (g(H)) in native gramicidin A (gA) and in two diastereoisomers (SS and RR) of the dioxolane-linked gA channels were measured in glycerylmonooleate/decane (GMO) and diphytanoylphosphatidylcholine/decane (DiPhPC) bilayers. Linear Arrhenius plots (ln (g(H)) versus K(-1)) were obtained for the native gA and RR channels in both types of bilayers, and for the SS channel in GMO bilayers only. The Arrhenius plot for proton transfer in the SS channel in DiPhPC bilayers had a break in linearity around 20 degrees C. This break seems to occur only when protons are the permeating cations in the SS channel. The activation energies (E(a)) for proton transfer in various gA channels (approximately 15 kJ/mol) are consistent with the rate-limiting step being in the channel and/or at the membrane-channel/solution interface, and not in bulk solution. E(a) values for proton transfer in gA channels are considerably smaller than for the permeation of nonproton currents in gA as well as in various other ion channels. The E(a) values for proton transfer in native gA channels are nearly the same in both GMO and DiPhPC bilayers. In contrast, for the dioxolane linked gA dimers, E(a) values were strongly modulated by the lipid environment. The Gibbs activation free energies (Delta G(#)(o)) for protons in various gA channels are within the range of 27-29 kJ/mol in GMO bilayers and of 20-22 kJ/mol in DiPhPC bilayers. The largest difference between Delta G(#)(o) for proton currents occurs between native gA (or SS channels) and the RR channel. In general, the activation entropy (Delta S) is mostly responsible for the differences between g(H) values in various gA channels, and also in distinct bilayers. However, significant differences between the activation enthalpies (Delta H(#)(o)) for proton transfer in the SS and RR channels occur in distinct membranes.

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Year:  2002        PMID: 11751307      PMCID: PMC1302460          DOI: 10.1016/S0006-3495(02)75385-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  27 in total

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Authors:  P C Jordan
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Authors:  K M Armstrong; E P Quigley; P Quigley; D S Crumrine; S Cukierman
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3.  The conduction of protons in different stereoisomers of dioxolane-linked gramicidin A channels.

Authors:  E P Quigley; P Quigley; D S Crumrine; S Cukierman
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

4.  A combined molecular dynamics and diffusion model of single proton conduction through gramicidin.

Authors:  M F Schumaker; R Pomès; B Roux
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Authors:  E Bamberg; P Läuger
Journal:  Biochim Biophys Acta       Date:  1974-10-29

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Authors:  S B Hladky; D A Haydon
Journal:  Biochim Biophys Acta       Date:  1972-08-09

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Authors:  D W Urry
Journal:  Proc Natl Acad Sci U S A       Date:  1971-03       Impact factor: 11.205

8.  The action of a carbonsuboxide dimerized gramicidin A on lipid bilayer membranes.

Authors:  E Bamberg; K Janko
Journal:  Biochim Biophys Acta       Date:  1977-03-17

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Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

10.  Gating and permeation in ion channels formed by gramicidin A and its dioxolane-linked dimer in Na(+) and Cs(+) solutions.

Authors:  E P Quigley; D S Crumrine; S Cukierman
Journal:  J Membr Biol       Date:  2000-04-01       Impact factor: 1.843

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  19 in total

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Authors:  Thomas E DeCoursey
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8.  Water alignment, dipolar interactions, and multiple proton occupancy during water-wire proton transport.

Authors:  Tom Chou
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

9.  Proton transfer in water wires in proteins: modulation by local constraint and polarity in gramicidin a channels.

Authors:  Shasikala Narayan; Debra L Wyatt; David S Crumrine; Samuel Cukierman
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10.  Temperature dependence of proton permeation through a voltage-gated proton channel.

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Journal:  J Gen Physiol       Date:  2009-09       Impact factor: 4.086

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