Literature DB >> 11738576

2'-O,4'-C-ethylene-bridged nucleic acids (ENA): highly nuclease-resistant and thermodynamically stable oligonucleotides for antisense drug.

Koji Morita1, Chikako Hasegawa, Masakatsu Kaneko, Shinya Tsutsumi, Junko Sone, Tomio Ishikawa, Takeshi Imanishi, Makoto Koizumi.   

Abstract

To develop antisense oligonucleotides, novel nucleosides, 2'-O,4'-C-ethylene nucleosides and their corresponding phosphoramidites, were synthesized as building blocks. The 1H NMR analysis showed that the 2'-O,4'-C-ethylene linkage of these nucleosides restricts the sugar puckering to the N-conformation as well as the linkage of 2'-O,4'-C-methylene nucleosides which are known as bridged nucleic acids (BNA) or locked nucleic acids (LNA). The ethylene-bridged nucleic acids (ENA) showed a high binding affinity for the complementary RNA strand (DeltaT(m)=+5.2 degrees C/modification) and were more nuclease-resistant than natural DNA and BNA/LNA. These results indicate that ENA have better properties as antisense oligonucleotides than BNA/LNA.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 11738576     DOI: 10.1016/s0960-894x(01)00683-7

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  22 in total

1.  Strong positional preference in the interaction of LNA oligonucleotides with DNA polymerase and proofreading exonuclease activities: implications for genotyping assays.

Authors:  Daniel A Di Giusto; Garry C King
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

Review 2.  Silencing disease genes in the laboratory and the clinic.

Authors:  Jonathan K Watts; David R Corey
Journal:  J Pathol       Date:  2011-11-09       Impact factor: 7.996

3.  Triplex formation with 2'-O,4'-C-ethylene-bridged nucleic acids (ENA) having C3'-endo conformation at physiological pH.

Authors:  Makoto Koizumi; Koji Morita; Makiko Daigo; Shinya Tsutsumi; Koji Abe; Satoshi Obika; Takeshi Imanishi
Journal:  Nucleic Acids Res       Date:  2003-06-15       Impact factor: 16.971

4.  Expanding the design horizon of antisense oligonucleotides with alpha-L-LNA.

Authors:  Miriam Frieden; Signe M Christensen; Nikolaj D Mikkelsen; Christoph Rosenbohm; Charlotte A Thrue; Majken Westergaard; Henrik F Hansen; Henrik Ørum; Troels Koch
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

5.  Thermodynamic analysis of nylon nucleic acids.

Authors:  Yu Liu; Risheng Wang; Liang Ding; Ruojie Sha; Philip S Lukeman; James W Canary; Nadrian C Seeman
Journal:  Chembiochem       Date:  2008-07-02       Impact factor: 3.164

6.  Allele-selective inhibition of mutant huntingtin expression with antisense oligonucleotides targeting the expanded CAG repeat.

Authors:  Keith T Gagnon; Hannah M Pendergraff; Glen F Deleavey; Eric E Swayze; Pierre Potier; John Randolph; Eric B Roesch; Jyoti Chattopadhyaya; Masad J Damha; C Frank Bennett; Christophe Montaillier; Marc Lemaitre; David R Corey
Journal:  Biochemistry       Date:  2010-11-08       Impact factor: 3.162

Review 7.  Antisense-mediated exon skipping: a versatile tool with therapeutic and research applications.

Authors:  Annemieke Aartsma-Rus; Gert-Jan B van Ommen
Journal:  RNA       Date:  2007-08-07       Impact factor: 4.942

8.  3'-Exonuclease resistance of DNA oligodeoxynucleotides containing O6-[4-oxo-4-(3-pyridyl)butyl]guanine.

Authors:  Soobong Park; Mahadevan Seetharaman; Alexis Ogdie; David Ferguson; Natalia Tretyakova
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

9.  Increasing the analytical sensitivity by oligonucleotides modified with para- and ortho-twisted intercalating nucleic acids--TINA.

Authors:  Uffe V Schneider; Imrich Géci; Nina Jøhnk; Nikolaj D Mikkelsen; Erik B Pedersen; Gorm Lisby
Journal:  PLoS One       Date:  2011-06-03       Impact factor: 3.240

10.  Design and analysis of effects of triplet repeat oligonucleotides in cell models for myotonic dystrophy.

Authors:  Anchel González-Barriga; Susan Am Mulders; Jeroen van de Giessen; Jeroen D Hooijer; Suzanne Bijl; Ingeborg Dg van Kessel; Josee van Beers; Judith Ct van Deutekom; Jack Am Fransen; Bé Wieringa; Derick G Wansink
Journal:  Mol Ther Nucleic Acids       Date:  2013-03-19       Impact factor: 10.183

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.