Literature DB >> 11733079

PNA for rapid microbiology.

Henrik Stender1, Mark Fiandaca, Jens J Hyldig-Nielsen, James Coull.   

Abstract

The acceptance of rRNA sequence diversity as a criterion for phylogenetic discrimination heralds the transition from microbiological identification methods based on phenotypic markers to assays employing molecular techniques. Robust amplification assays and sensitive direct detection methods are rapidly becoming the standard protocols of microbiology laboratories. The emergence of peptide nucleic acid (PNA) from its status as an academic curiosity to that of a promising and powerful molecular tool, coincides with, and complements, the transition to rapid molecular tests. The unique properties of PNA enable the development of assay formats, which go above and beyond the possibilities of DNA probes. PNA probes targeting specific rRNA sequences of yeast and bacteria with clinical, environmental, and industrial value have recently been developed and applied to a variety of rapid assay formats. Some simply incorporate the sensitivity and specificity of PNA probes into traditional methods, such as membrane filtration and microscopic analysis; others involve recent techniques such as real-time and end-point analysis of amplification reactions.

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Year:  2002        PMID: 11733079     DOI: 10.1016/s0167-7012(01)00340-2

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  42 in total

1.  Fluorescence in situ hybridization method using a peptide nucleic acid probe for identification of Salmonella spp. in a broad spectrum of samples.

Authors:  C Almeida; N F Azevedo; R M Fernandes; C W Keevil; M J Vieira
Journal:  Appl Environ Microbiol       Date:  2010-05-07       Impact factor: 4.792

2.  Use of DNA and peptide nucleic acid molecular beacons for detection and quantification of rRNA in solution and in whole cells.

Authors:  Chuanwu Xi; Michal Balberg; Stephen A Boppart; Lutgarde Raskin
Journal:  Appl Environ Microbiol       Date:  2003-09       Impact factor: 4.792

Review 3.  Single-cell microbiology: tools, technologies, and applications.

Authors:  Byron F Brehm-Stecher; Eric A Johnson
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

4.  Synthesis and properties of peptide nucleic acid labeled at the N-terminus with HiLyte Fluor 488 fluorescent dye.

Authors:  Dziyana Hnedzko; Dennis W McGee; Eriks Rozners
Journal:  Bioorg Med Chem       Date:  2016-07-06       Impact factor: 3.641

5.  Design and evaluation of 16S rRNA-targeted peptide nucleic acid probes for whole-cell detection of members of the genus Listeria.

Authors:  Byron F Brehm-Stecher; Jens J Hyldig-Nielsen; Eric A Johnson
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

6.  Fluorescence in situ hybridization using peptide nucleic acid probes for rapid detection of Mycobacterium avium subsp. avium and Mycobacterium avium subsp. paratuberculosis in potable-water biofilms.

Authors:  Markku J Lehtola; Eila Torvinen; Ilkka T Miettinen; C William Keevil
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

7.  Enumeration of respiring Pseudomonas spp. in milk within 6 hours by fluorescence in situ hybridization following formazan reduction.

Authors:  Akiko Kitaguchi; Nobuyasu Yamaguchi; Masao Nasu
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

8.  Evaluation of in situ methods used to detect Mycobacterium avium subsp. paratuberculosis in samples from patients with Crohn's disease.

Authors:  Mangalakumari Jeyanathan; David C Alexander; Christine Y Turenne; Christiane Girard; Marcel A Behr
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

9.  Detection of group B streptococci in Lim broth by use of group B streptococcus peptide nucleic acid fluorescent in situ hybridization and selective and nonselective agars.

Authors:  Naomi S Montague; Timothy J Cleary; Octavio V Martinez; Gary W Procop
Journal:  J Clin Microbiol       Date:  2008-07-30       Impact factor: 5.948

10.  DNA detection using water-soluble conjugated polymers and peptide nucleic acid probes.

Authors:  Brent S Gaylord; Alan J Heeger; Guillermo C Bazan
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-07       Impact factor: 11.205

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