Literature DB >> 11728602

Synthesis and application of caged peptides and proteins.

Y Shigeri1, Y Tatsu, N Yumoto.   

Abstract

Caged compounds have covalently attached groups that are rapidly cleaved upon exposure to UV light. Attachment of photolabile groups makes the molecule inert until photolysis releases it in its bioactive form. When caged compounds are applied to the experimental system in advance, the concentration jump of biologically active substances can be brought about immediately in a limited area upon irradiation with pulsed and focused UV light. Therefore, caged compounds of low molecular weight, which are commercially available, have been used effectively to study the mechanisms of temporal biological phenomena, such as muscle contraction, intracellular signaling, and neurotransmission. Because many proteins and peptides play important roles in these phenomena, their caged derivatives should serve as powerful tools to clarify complex biological systems. To prepare caged proteins and peptides, several groups have improved upon a chemical modification method, as well as developed two new methods: (1) nonsense codon suppression and (2) solid-phase peptide synthesis. In this review, we summarize recent advances made in the design, preparation, and application of caged peptides and proteins.

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Year:  2001        PMID: 11728602     DOI: 10.1016/s0163-7258(01)00148-6

Source DB:  PubMed          Journal:  Pharmacol Ther        ISSN: 0163-7258            Impact factor:   12.310


  12 in total

Review 1.  Two promising future developments of cryo-EM: capturing short-lived states and mapping a continuum of states of a macromolecule.

Authors:  Bo Chen; Joachim Frank
Journal:  Microscopy (Oxf)       Date:  2015-10-31       Impact factor: 1.571

Review 2.  Measuring the kinetics of calcium binding proteins with flash photolysis.

Authors:  Guido C Faas; Istvan Mody
Journal:  Biochim Biophys Acta       Date:  2011-10-07

3.  Control of the yeast cell cycle with a photocleavable alpha-factor analogue.

Authors:  Laurie L Parker; Josh W Kurutz; Stephen B H Kent; Stephen J Kron
Journal:  Angew Chem Int Ed Engl       Date:  2006-09-25       Impact factor: 15.336

4.  Photochemical gating of intracellular Ca2+ release channels.

Authors:  Jiahong Ni; Darryl A Auston; David A Freilich; Sukumaran Muralidharan; Eric A Sobie; Joseph P Y Kao
Journal:  J Am Chem Soc       Date:  2007-04-11       Impact factor: 15.419

Review 5.  Photoremovable protecting groups in chemistry and biology: reaction mechanisms and efficacy.

Authors:  Petr Klán; Tomáš Šolomek; Christian G Bochet; Aurélien Blanc; Richard Givens; Marina Rubina; Vladimir Popik; Alexey Kostikov; Jakob Wirz
Journal:  Chem Rev       Date:  2012-12-21       Impact factor: 60.622

6.  Caged vanilloid ligands for activation of TRPV1 receptors by 1- and 2-photon excitation.

Authors:  Jun Zhao; Tony D Gover; Sukumaran Muralidharan; Darryl A Auston; Daniel Weinreich; Joseph P Y Kao
Journal:  Biochemistry       Date:  2006-04-18       Impact factor: 3.162

Review 7.  Illuminating the chemistry of life: design, synthesis, and applications of "caged" and related photoresponsive compounds.

Authors:  Hsien-Ming Lee; Daniel R Larson; David S Lawrence
Journal:  ACS Chem Biol       Date:  2009-06-19       Impact factor: 5.100

Review 8.  Light-mediated remote control of signaling pathways.

Authors:  Melanie A Priestman; David S Lawrence
Journal:  Biochim Biophys Acta       Date:  2009-09-16

9.  Implementation of a flash-photolysis system for time-resolved cryo-electron microscopy.

Authors:  Tanvir R Shaikh; David Barnard; Xing Meng; Terence Wagenknecht
Journal:  J Struct Biol       Date:  2008-12-10       Impact factor: 2.867

10.  Ncm, a Photolabile Group for Preparation of Caged Molecules: Synthesis and Biological Application.

Authors:  Sukumaran Muralidharan; Nathaniel D A Dirda; Elizabeth J Katz; Cha-Min Tang; Sharba Bandyopadhyay; Patrick O Kanold; Joseph P Y Kao
Journal:  PLoS One       Date:  2016-10-03       Impact factor: 3.240

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