Literature DB >> 11717301

The lytB gene of Escherichia coli is essential and specifies a product needed for isoprenoid biosynthesis.

S McAteer1, A Coulson, N McLennan, M Masters.   

Abstract

LytB and GcpE, because they are codistributed with other pathway enzymes, have been predicted to catalyze unknown steps in the nonmevalonate pathway for isoprenoid biosynthesis. We constructed a conditional Escherichia coli lytB mutant and found that LytB is essential for survival and that depletion of LytB results in cell lysis, which is consistent with a role for this protein in isoprenoid biosynthesis. Alcohols which can be converted to pathway intermediates beyond the hypothesized LytB step(s) support limited growth of E. coli lytB mutants. An informatic analysis of protein structure suggested that GcpE is a globular protein of the TIM barrel class and that LytB is also a globular protein. Possible biochemical roles for LytB and GcpE are suggested.

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Year:  2001        PMID: 11717301      PMCID: PMC95591          DOI: 10.1128/JB.183.24.7403-7407.2001

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  23 in total

1.  GcpE is involved in the 2-C-methyl-D-erythritol 4-phosphate pathway of isoprenoid biosynthesis in Escherichia coli.

Authors:  B Altincicek; A K Kollas; S Sanderbrand; J Wiesner; M Hintz; E Beck; H Jomaa
Journal:  J Bacteriol       Date:  2001-04       Impact factor: 3.490

2.  Biosynthesis of terpenoids: YchB protein of Escherichia coli phosphorylates the 2-hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.

Authors:  H Lüttgen; F Rohdich; S Herz; J Wungsintaweekul; S Hecht; C A Schuhr; M Fellermeier; S Sagner; M H Zenk; A Bacher; W Eisenreich
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-01       Impact factor: 11.205

Review 3.  Linkage map of Escherichia coli K-12, edition 10: the physical map.

Authors:  K E Rudd
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

4.  The complete genome sequence of Escherichia coli K-12.

Authors:  F R Blattner; G Plunkett; C A Bloch; N T Perna; V Burland; M Riley; J Collado-Vides; J D Glasner; C K Rode; G F Mayhew; J Gregor; N W Davis; H A Kirkpatrick; M A Goeden; D J Rose; B Mau; Y Shao
Journal:  Science       Date:  1997-09-05       Impact factor: 47.728

5.  Identification of the genes in the Escherichia coli ileS-lsp operon. Analysis of multiple polycistronic mRNAs made in vivo.

Authors:  K W Miller; J Bouvier; P Stragier; H C Wu
Journal:  J Biol Chem       Date:  1987-05-25       Impact factor: 5.157

6.  Characterization of 1-deoxy-D-xylulose 5-phosphate reductoisomerase, an enzyme involved in isopentenyl diphosphate biosynthesis, and identification of its catalytic amino acid residues.

Authors:  T Kuzuyama; S Takahashi; M Takagi; H Seto
Journal:  J Biol Chem       Date:  2000-06-30       Impact factor: 5.157

7.  Genetic evidence of branching in the isoprenoid pathway for the production of isopentenyl diphosphate and dimethylallyl diphosphate in Escherichia coli.

Authors:  M Rodríguez-Concepción; N Campos; L María Lois; C Maldonado; J F Hoeffler; C Grosdemange-Billiard; M Rohmer; A Boronat
Journal:  FEBS Lett       Date:  2000-05-19       Impact factor: 4.124

8.  Cytidine 5'-triphosphate-dependent biosynthesis of isoprenoids: YgbP protein of Escherichia coli catalyzes the formation of 4-diphosphocytidyl-2-C-methylerythritol.

Authors:  F Rohdich; J Wungsintaweekul; M Fellermeier; S Sagner; S Herz; K Kis; W Eisenreich; A Bacher; M H Zenk
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-12       Impact factor: 11.205

9.  THE 1-DEOXY-D-XYLULOSE-5-PHOSPHATE PATHWAY OF ISOPRENOID BIOSYNTHESIS IN PLANTS.

Authors:  Hartmut K. Lichtenthaler
Journal:  Annu Rev Plant Physiol Plant Mol Biol       Date:  1999-06

10.  A genome-based approach for the identification of essential bacterial genes.

Authors:  F Arigoni; F Talabot; M Peitsch; M D Edgerton; E Meldrum; E Allet; R Fish; T Jamotte; M L Curchod; H Loferer
Journal:  Nat Biotechnol       Date:  1998-09       Impact factor: 54.908

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  34 in total

1.  The amino-terminal conserved domain of 4-hydroxy-3-methylbut-2-enyl diphosphate reductase is critical for its function in oxygen-evolving photosynthetic organisms.

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Journal:  Plant Signal Behav       Date:  2015

2.  A carotenoid synthesis gene cluster from Algoriphagus sp. KK10202C with a novel fusion-type lycopene beta-cyclase gene.

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Journal:  Mol Genet Genomics       Date:  2006-04-20       Impact factor: 3.291

3.  RodZ, a component of the bacterial core morphogenic apparatus.

Authors:  S Anisah Alyahya; Roger Alexander; Teresa Costa; Adriano O Henriques; Thierry Emonet; Christine Jacobs-Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-21       Impact factor: 11.205

4.  Silencing of Essential Genes within a Highly Coordinated Operon in Escherichia coli.

Authors:  Shan Goh; Angela Hohmeier; Timothy C Stone; Victoria Offord; Francisco Sarabia; Cristina Garcia-Ruiz; Liam Good
Journal:  Appl Environ Microbiol       Date:  2015-06-12       Impact factor: 4.792

5.  Strain-specific response to ampicillin in Wolbachia-infected mosquito cell lines.

Authors:  Ann M Fallon
Journal:  In Vitro Cell Dev Biol Anim       Date:  2018-08-01       Impact factor: 2.416

6.  A high-throughput screening campaign to identify inhibitors of DXP reductoisomerase (IspC) and MEP cytidylyltransferase (IspD).

Authors:  Amanda Haymond; Tyrone Dowdy; Chinchu Johny; Claire Johnson; Haley Ball; Allyson Dailey; Brandon Schweibenz; Karen Villarroel; Richard Young; Clark J Mantooth; Trishal Patel; Jessica Bases; Cynthia S Dowd; Robin D Couch
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7.  Isoprenoid metabolism in apicomplexan parasites.

Authors:  Leah Imlay; Audrey R Odom
Journal:  Curr Clin Microbiol Rep       Date:  2014-12-01

8.  Isolation and characterization of 4-hydroxy-3-methylbut-2-enyl diphosphate reductase gene from Botryococcus braunii, race B.

Authors:  Hidenobu Uchida; Koremitsu Sumimoto; Tomoka Oki; Ichiro Nishii; Eiichi Mizohata; Shigeki Matsunaga; Shigeru Okada
Journal:  J Plant Res       Date:  2018-05-03       Impact factor: 2.629

9.  Functional evidence for the critical amino-terminal conserved domain and key amino acids of Arabidopsis 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE.

Authors:  Wei-Yu Hsieh; Tzu-Ying Sung; Hsin-Tzu Wang; Ming-Hsiun Hsieh
Journal:  Plant Physiol       Date:  2014-07-18       Impact factor: 8.340

10.  Kinetic characterization and phosphoregulation of the Francisella tularensis 1-deoxy-D-xylulose 5-phosphate reductoisomerase (MEP synthase).

Authors:  Safdar Jawaid; Heather Seidle; Weidong Zhou; Hafsa Abdirahman; Maher Abadeer; Joseph H Hix; Monique L van Hoek; Robin D Couch
Journal:  PLoS One       Date:  2009-12-14       Impact factor: 3.240

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