Literature DB >> 11716731

Computational analysis of the potential energy surfaces of glycerol in the gas and aqueous phases: effects of level of theory, basis set, and solvation on strongly intramolecularly hydrogen-bonded systems.

C S Callam1, S J Singer, T L Lowary, C M Hadad.   

Abstract

The 126 possible conformations of 1,2,3-propanetriol (glycerol) have been studied by ab initio molecular orbital and density functional theory calculations in the gas and aqueous phases at multiple levels of theory and basis sets. The partial potential energy surface for glycerol as well as an analysis of the conformational properties and hydrogen-bonding trends in both phases have been obtained. In the gas phase at the G2(MP2) and CBS-QB3 levels of theory, the important, low-energy conformers are structures 100 and 95. In the aqueous phase at the SM5.42/HF/6-31G* level of theory, the lowest energy conformers are structures 95 and 46. Boltzmann distributions have been determined from these high-level calculations, and good agreement is observed when these distributions are compared to the available experimental data. These calculations indicate that the enthalpic and entropic contributions to the Gibbs free energy are important for an accurate determination of the conformational and energetic preferences of glycerol. Different levels of theory and basis sets were used in order to understand the effects of nonbonded interactions (i.e., intramolecular hydrogen bonding). The efficiency of basis set and level of theory in dealing with the issue of intramolecular hydrogen bonding and reproducing the correct energetic and geometrical trends is discussed, especially with relevance to practical computational methods for larger polyhydroxylated compounds, such as oligosaccharides.

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Year:  2001        PMID: 11716731     DOI: 10.1021/ja011785r

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  5 in total

Review 1.  Competing intramolecular vs. intermolecular hydrogen bonds in solution.

Authors:  Peter I Nagy
Journal:  Int J Mol Sci       Date:  2014-10-28       Impact factor: 5.923

2.  A combined experimental and computational study of the esterification reaction of glycerol with acetic acid.

Authors:  Gabriel Alejandro Bedogni; Cristina Liliana Padró; Nora Beatriz Okulik
Journal:  J Mol Model       Date:  2014-03-16       Impact factor: 1.810

3.  On achieving experimental accuracy from molecular dynamics simulations of flexible molecules: aqueous glycerol.

Authors:  Austin B Yongye; B Lachele Foley; Robert J Woods
Journal:  J Phys Chem A       Date:  2008-03-01       Impact factor: 2.781

4.  Effect of Aminosilane Coupling Agents with Different Chain Lengths on Thermo-Mechanical Properties of Cross-Linked Epoxy Resin.

Authors:  Yujing Tang; Chao Tang; Dong Hu; Yingang Gui
Journal:  Nanomaterials (Basel)       Date:  2018-11-19       Impact factor: 5.076

5.  Glass polymorphism in glycerol-water mixtures: I. A computer simulation study.

Authors:  David A Jahn; Jessina Wong; Johannes Bachler; Thomas Loerting; Nicolas Giovambattista
Journal:  Phys Chem Chem Phys       Date:  2016-04-28       Impact factor: 3.676

  5 in total

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