Literature DB >> 11713311

Overexpression, purification and characterization of RecJ protein from Thermus thermophilus HB8 and its core domain.

A Yamagata1, R Masui, Y Kakuta, S Kuramitsu, K Fukuyama.   

Abstract

A recJ homolog was cloned from the extremely thermophilic bacterium Thermus themophilus HB8. It encodes a 527 amino acid protein that has 33% identity to Escherichia coli RecJ protein and includes the characteristic motifs conserved among RecJ homologs. Although T.thermophilus RecJ protein (ttRecJ) was expressed as an inclusion body, it was purified in soluble form through denaturation with urea and subsequent refolding steps. Limited proteolysis showed that ttRecJ has a protease-resistant core domain, which includes all the conserved motifs. We constructed a truncated ttRecJ gene that corresponds to the core domain (cd-ttRecJ). cd-ttRecJ was overexpressed in soluble form and purified. ttRecJ and cd-ttRecJ were stable up to 60 degrees C. Size exclusion chromatography indicated that ttRecJ exists in several oligomeric states, whereas cd-ttRecJ is monomeric in solution. Both proteins have 5'-->3' exonuclease activity, which was enhanced by increasing the temperature to 50 degrees C. Mg(2+), Mn(2+) or Co(2+) ions were required to activate both proteins, whereas Ca(2+) and Zn(2+) had no effects.

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Year:  2001        PMID: 11713311      PMCID: PMC92510          DOI: 10.1093/nar/29.22.4617

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  20 in total

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Review 3.  Protein refolding for industrial processes.

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Review 4.  Initiation of genetic recombination and recombination-dependent replication.

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5.  Structure of Escherichia coli exonuclease I suggests how processivity is achieved.

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Journal:  Nat Struct Biol       Date:  2000-12

Review 6.  Structural genomics projects in Japan.

Authors:  S Yokoyama; Y Matsuo; H Hirota; T Kigawa; M Shirouzu; Y Kuroda; H Kurumizaka; S Kawaguchi; Y Ito; T Shibata; M Kainosho; Y Nishimura; Y Inoue; S Kuramitsu
Journal:  Prog Biophys Mol Biol       Date:  2000       Impact factor: 3.667

7.  In vivo requirement for RecJ, ExoVII, ExoI, and ExoX in methyl-directed mismatch repair.

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Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

9.  Structural genomics projects in Japan.

Authors:  S Yokoyama; H Hirota; T Kigawa; T Yabuki; M Shirouzu; T Terada; Y Ito; Y Matsuo; Y Kuroda; Y Nishimura; Y Kyogoku; K Miki; R Masui; S Kuramitsu
Journal:  Nat Struct Biol       Date:  2000-11

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  14 in total

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5.  The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity.

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7.  Molecular mechanisms of the whole DNA repair system: a comparison of bacterial and eukaryotic systems.

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8.  DNA mismatch repair in eukaryotes and bacteria.

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9.  A novel single-stranded DNA-specific 3'-5' exonuclease, Thermus thermophilus exonuclease I, is involved in several DNA repair pathways.

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Journal:  Nucleic Acids Res       Date:  2006-02-18       Impact factor: 16.971

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