Literature DB >> 11103994

Structural genomics projects in Japan.

S Yokoyama1, H Hirota, T Kigawa, T Yabuki, M Shirouzu, T Terada, Y Ito, Y Matsuo, Y Kuroda, Y Nishimura, Y Kyogoku, K Miki, R Masui, S Kuramitsu.   

Abstract

Two major structural genomics projects exist in Japan. The oldest, the RIKEN Structural Genomics Initiative, has two major goals: to determine bacterial, mammalian, and plant protein structures by X-ray crystallography and NMR spectroscopy and to perform functional analyses with the target proteins. The newest, the structural genomics project at the Biological Information Research Center, focuses on human membrane proteins.

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Year:  2000        PMID: 11103994     DOI: 10.1038/80712

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  110 in total

1.  Automated search of natively folded protein fragments for high-throughput structure determination in structural genomics.

Authors:  Y Kuroda; K Tani; Y Matsuo; S Yokoyama
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

Review 2.  Structural genomics: an approach to the protein folding problem.

Authors:  G T Montelione
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

3.  Secure web book to store structural genomics research data.

Authors:  Babu A Manjasetty; Klaus Höppner; Uwe Mueller; Udo Heinemann
Journal:  J Struct Funct Genomics       Date:  2003

4.  On the evaluation and optimization of protein X-ray structures for pKa calculations.

Authors:  Jens Erik Nielsen; J Andrew McCammon
Journal:  Protein Sci       Date:  2003-02       Impact factor: 6.725

5.  Crystal structures of the quinone oxidoreductase from Thermus thermophilus HB8 and its complex with NADPH: implication for NADPH and substrate recognition.

Authors:  Yoshimitsu Shimomura; Yoshimitsu Kakuta; Keiichi Fukuyama
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

6.  Role for NMR in structural genomics.

Authors:  Michael A Kennedy; Gaetano T Montelione; Cheryl H Arrowsmith; John L Markley
Journal:  J Struct Funct Genomics       Date:  2002

Review 7.  Target selection and determination of function in structural genomics.

Authors:  James D Watson; Annabel E Todd; James Bray; Roman A Laskowski; Aled Edwards; Andrzej Joachimiak; Christine A Orengo; Janet M Thornton
Journal:  IUBMB Life       Date:  2003 Apr-May       Impact factor: 3.885

8.  SPINS: standardized protein NMR storage. A data dictionary and object-oriented relational database for archiving protein NMR spectra.

Authors:  Michael C Baran; Hunter N B Moseley; Gurmukh Sahota; Gaetano T Montelione
Journal:  J Biomol NMR       Date:  2002-10       Impact factor: 2.835

9.  Rapid purification and crystal structure analysis of a small protein carrying two terminal affinity tags.

Authors:  Uwe Mueller; Konrad Büssow; Anne Diehl; Franz J Bartl; Frank H Niesen; Lajos Nyarsik; Udo Heinemann
Journal:  J Struct Funct Genomics       Date:  2003

10.  Structural aspects of RbfA action during small ribosomal subunit assembly.

Authors:  Partha P Datta; Daniel N Wilson; Masahito Kawazoe; Neil K Swami; Tatsuya Kaminishi; Manjuli R Sharma; Timothy M Booth; Chie Takemoto; Paola Fucini; Shigeyuki Yokoyama; Rajendra K Agrawal
Journal:  Mol Cell       Date:  2007-11-09       Impact factor: 17.970

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