Literature DB >> 11710982

RNA-binding proteins and circadian rhythms in Arabidopsis thaliana.

D Staiger1.   

Abstract

An Arabidopsis transcript preferentially expressed at the end of the daily light period codes for the RNA-binding protein AtGRP7. A reverse genetic approach in Arabidopsis thaliana has revealed its role in the generation of circadian rhythmicity: AtGRP7 is part of a negative feedback loop through which it influences the oscillations of its own transcript. Biochemical and genetic experiments indicate a mechanism for this autoregulatory circuit: Atgrp7 gene transcription is rhythmically activated by the circadian clock during the day. The AtGPR7 protein accumulates with a certain delay and represses further accumulation of its transcript, presumably at the post-transcriptional level. In this respect, the AtGRP7 feedback loop differs from known circadian oscillators in the fruitfly Drosophila and mammals based on oscillating clock proteins that repress transcription of their own genes with a 24 h rhythm. It is proposed that the AtGRP7 feedback loop may act within an output pathway from the Arabidopsis clock.

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Year:  2001        PMID: 11710982      PMCID: PMC1088551          DOI: 10.1098/rstb.2001.0964

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  49 in total

1.  Circadian dysfunction causes aberrant hypocotyl elongation patterns in Arabidopsis.

Authors:  M J Dowson-Day; A J Millar
Journal:  Plant J       Date:  1999-01       Impact factor: 6.417

2.  Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element.

Authors:  D Staiger; K Apel
Journal:  Mol Gen Genet       Date:  1999-06

3.  Circadian expression of the luciferin-binding protein correlates with the binding of a protein to the 3' untranslated region of its mRNA.

Authors:  M Mittag; D H Lee; J W Hastings
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

4.  Circadian clock mutants in Arabidopsis identified by luciferase imaging.

Authors:  A J Millar; I A Carré; C A Strayer; N H Chua; S A Kay
Journal:  Science       Date:  1995-02-24       Impact factor: 47.728

Review 5.  Role of posttranscriptional regulation in circadian clocks: lessons from Drosophila.

Authors:  I Edery
Journal:  Chronobiol Int       Date:  1999-07       Impact factor: 2.877

6.  FKF1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis.

Authors:  D C Nelson; J Lasswell; L E Rogg; M A Cohen; B Bartel
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

7.  ZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis.

Authors:  D E Somers; T F Schultz; M Milnamow; S A Kay
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

8.  mRNP4, a major mRNA-binding protein from Xenopus oocytes is identical to transcription factor FRG Y2.

Authors:  S Deschamps; A Viel; M Garrigos; H Denis; M le Maire
Journal:  J Biol Chem       Date:  1992-07-15       Impact factor: 5.157

9.  The Atger3 promoter confers circadian clock-regulated transcription with peak expression at the beginning of the night.

Authors:  D Staiger; K Apel; G Trepp
Journal:  Plant Mol Biol       Date:  1999-07       Impact factor: 4.076

10.  Multiple DNA-Protein Complexes at a Circadian-Regulated Promoter Element.

Authors:  I. A. Carre; S. A. Kay
Journal:  Plant Cell       Date:  1995-12       Impact factor: 11.277

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  19 in total

Review 1.  Spotlight on post-transcriptional control in the circadian system.

Authors:  Dorothee Staiger; Tino Köster
Journal:  Cell Mol Life Sci       Date:  2010-08-30       Impact factor: 9.261

Review 2.  Picking out parallels: plant circadian clocks in context.

Authors:  H G McWatters; L C Roden; D Staiger
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-11-29       Impact factor: 6.237

3.  mRNA Interactome Capture from Plant Protoplasts.

Authors:  Zhicheng Zhang; Kurt Boonen; Meixia Li; Koen Geuten
Journal:  J Vis Exp       Date:  2017-07-28       Impact factor: 1.355

4.  Circadian control of messenger RNA stability. Association with a sequence-specific messenger RNA decay pathway.

Authors:  Preetmoninder Lidder; Rodrigo A Gutiérrez; Patrice A Salomé; C Robertson McClung; Pamela J Green
Journal:  Plant Physiol       Date:  2005-07-29       Impact factor: 8.340

5.  Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays.

Authors:  Samuel P Hazen; Felix Naef; Tom Quisel; Joshua M Gendron; Huaming Chen; Joseph R Ecker; Justin O Borevitz; Steve A Kay
Journal:  Genome Biol       Date:  2009-02-11       Impact factor: 13.583

6.  PCC1: a merging point for pathogen defence and circadian signalling in Arabidopsis.

Authors:  Nicolas Sauerbrunn; Nikolaus L Schlaich
Journal:  Planta       Date:  2003-11-12       Impact factor: 4.116

Review 7.  Complexity of the alternative splicing landscape in plants.

Authors:  Anireddy S N Reddy; Yamile Marquez; Maria Kalyna; Andrea Barta
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

8.  Global transcript profiling of transgenic plants constitutively overexpressing the RNA-binding protein AtGRP7.

Authors:  Corinna Streitner; Lars Hennig; Christin Korneli; Dorothee Staiger
Journal:  BMC Plant Biol       Date:  2010-10-14       Impact factor: 4.215

9.  Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis.

Authors:  Jan C Schöning; Corinna Streitner; Irmtraud M Meyer; Yahong Gao; Dorothee Staiger
Journal:  Nucleic Acids Res       Date:  2008-11-04       Impact factor: 16.971

10.  An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana.

Authors:  Corinna Streitner; Tino Köster; Craig G Simpson; Paul Shaw; Selahattin Danisman; John W S Brown; Dorothee Staiger
Journal:  Nucleic Acids Res       Date:  2012-10-04       Impact factor: 16.971

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