Literature DB >> 11710976

The Neurospora circadian clock: simple or complex?

D Bell-Pedersen1, S K Crosthwaite, P L Lakin-Thomas, M Merrow, M Økland.   

Abstract

The fungus Neurospora crassa is being used by a number of research groups as a model organism to investigate circadian (daily) rhythmicity. In this review we concentrate on recent work relating to the complexity of the circadian system in this organism. We discuss: the advantages of Neurospora as a model system for clock studies; the frequency (frq), white collar-1 and white collar-2 genes and their roles in rhythmicity; the phenomenon of rhythmicity in null frq mutants and its implications for clock mechanisms; the study of output pathways using clock-controlled genes; other rhythms in fungi; mathematical modelling of the Neurospora circadian system; and the application of new technologies to the study of Neurospora rhythmicity. We conclude that there may be many gene products involved in the clock mechanism, there may be multiple interacting oscillators comprising the clock mechanism, there may be feedback from output pathways onto the oscillator(s) and from the oscillator(s) onto input pathways, and there may be several independent clocks coexisting in one organism. Thus even a relatively simple lower eukaryote can be used to address questions about a complex, networked circadian system.

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Year:  2001        PMID: 11710976      PMCID: PMC1088545          DOI: 10.1098/rstb.2001.0968

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  70 in total

1.  Neurospora: the organism behind the molecular revolution.

Authors:  D D Perkins
Journal:  Genetics       Date:  1992-04       Impact factor: 4.562

Review 2.  The duplication cycle in Aspergillus nidulans.

Authors:  S D Harris
Journal:  Fungal Genet Biol       Date:  1997-08       Impact factor: 3.495

Review 3.  Rhythms of differentiation and diacylglycerol in Neurospora.

Authors:  P L Lakin-Thomas; V D Gooch; M Ramsdale
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-11-29       Impact factor: 6.237

Review 4.  Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora.

Authors:  J C Leloup; D Gonze; A Goldbeter
Journal:  J Biol Rhythms       Date:  1999-12       Impact factor: 3.182

5.  Circadian clock mutants in Arabidopsis identified by luciferase imaging.

Authors:  A J Millar; I A Carré; C A Strayer; N H Chua; S A Kay
Journal:  Science       Date:  1995-02-24       Impact factor: 47.728

6.  sn-1,2-diacylglycerol levels in the fungus Neurospora crassa display circadian rhythmicity.

Authors:  M Ramsdale; P L Lakin-Thomas
Journal:  J Biol Chem       Date:  2000-09-08       Impact factor: 5.157

7.  Light induction of the clock-controlled gene ccg-1 is not transduced through the circadian clock in Neurospora crassa.

Authors:  G Arpaia; J J Loros; J C Dunlap; G Morelli; G Macino
Journal:  Mol Gen Genet       Date:  1995-04-20

8.  The interplay of light and the circadian clock. Independent dual regulation of clock-controlled gene ccg-2(eas).

Authors:  G Arpaia; J J Loros; J C Dunlap; G Morelli; G Macino
Journal:  Plant Physiol       Date:  1993-08       Impact factor: 8.340

9.  The Neurospora circadian clock-controlled gene, ccg-2, is allelic to eas and encodes a fungal hydrophobin required for formation of the conidial rodlet layer.

Authors:  D Bell-Pedersen; J C Dunlap; J J Loros
Journal:  Genes Dev       Date:  1992-12       Impact factor: 11.361

10.  Amplitude model for the effects of mutations and temperature on period and phase resetting of the Neurospora circadian oscillator.

Authors:  P L Lakin-Thomas; S Brody; G G Coté
Journal:  J Biol Rhythms       Date:  1991       Impact factor: 3.182

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  18 in total

1.  Intrinsic noise and division cycle effects on an abstract biological oscillator.

Authors:  Michail Stamatakis; Nikos V Mantzaris
Journal:  Chaos       Date:  2010-09       Impact factor: 3.642

2.  Quantitative trait loci for the circadian clock in Neurospora crassa.

Authors:  Tae-Sung Kim; Benjamin A Logsdon; Sohyun Park; Jason G Mezey; Kwangwon Lee
Journal:  Genetics       Date:  2007-10-18       Impact factor: 4.562

Review 3.  Skin, reactive oxygen species, and circadian clocks.

Authors:  Mary A Ndiaye; Minakshi Nihal; Gary S Wood; Nihal Ahmad
Journal:  Antioxid Redox Signal       Date:  2013-11-21       Impact factor: 8.401

4.  A novel cryptochrome-dependent oscillator in Neurospora crassa.

Authors:  Imade Y Nsa; Nirmala Karunarathna; Xiaoguang Liu; Howard Huang; Brittni Boetteger; Deborah Bell-Pedersen
Journal:  Genetics       Date:  2014-10-30       Impact factor: 4.562

Review 5.  Circadian rhythm connections to oxidative stress: implications for human health.

Authors:  Melissa Wilking; Mary Ndiaye; Hasan Mukhtar; Nihal Ahmad
Journal:  Antioxid Redox Signal       Date:  2013-04-24       Impact factor: 8.401

Review 6.  Genetic interactions between clock mutations in Neurospora crassa: can they help us to understand complexity?

Authors:  L W Morgan; J F Feldman; D Bell-Pedersen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-11-29       Impact factor: 6.237

Review 7.  Cellular signalling and the complexity of biological timing: insights from the ultradian clock of Schizosaccharomyces pombe.

Authors:  F Kippert
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-11-29       Impact factor: 6.237

8.  Circadian rhythms in Neurospora crassa: dynamics of the clock component frequency visualized using a fluorescent reporter.

Authors:  Ernestina Castro-Longoria; Michael Ferry; Salomón Bartnicki-Garcia; Jeff Hasty; Stuart Brody
Journal:  Fungal Genet Biol       Date:  2010-01-04       Impact factor: 3.495

9.  Circadian clock genes frequency and white collar-1 are not essential for entrainment to temperature cycles in Neurospora crassa.

Authors:  Patricia L Lakin-Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-14       Impact factor: 11.205

10.  Robustness from flexibility in the fungal circadian clock.

Authors:  Ozgur E Akman; David A Rand; Paul E Brown; Andrew J Millar
Journal:  BMC Syst Biol       Date:  2010-06-24
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