Literature DB >> 11705375

Crystal structures of the precursor form of glucose-fructose oxidoreductase from Zymomonas mobilis and its complexes with bound ligands.

D Nurizzo1, D Halbig, G A Sprenger, E N Baker.   

Abstract

The NADP(H)-dependent enzyme glucose-fructose oxidoreductase (GFOR) is a classic example of a redox protein that is translocated across a membrane in fully folded form. GFOR is synthesized in the cytoplasm with a 52-residue signal peptide, giving a precursor form, preGFOR, that is fully active and has its cofactor tightly bound. A twin-arginine motif in the signal peptide directs it to a Sec-independent pathway by which it is translocated, in fully folded form, into the periplasm where it functions to produce sorbitol for osmoprotection. We have determined the crystal structures of four different forms of preGFOR, (i) oxidized preGFOR, with succinate bound in the active site, (ii) oxidized preGFOR with glycerol bound, (iii) reduced preGFOR in 0.3 M glucose, and (iv) reduced preGFOR in 1.5 M sorbitol, at resolutions of 2.2, 2.05, 2.5, and 2.6 A, respectively. In all four crystal structures, the signal peptide is disordered, implying a flexibility that may be important for its interaction with the translocation apparatus; a factor contributing to this disorder may be the high positive charge of the protein surface in the region where the signal peptide emerges. This may disfavor a stable association between the signal peptide and the rest of the protein. The crystal structures show that the mature enzyme portion of preGFOR is identical to native GFOR, in structure and cofactor binding, explaining the enzymatic activity of the precursor form. In the glycerol complex, preGFOR(gll), a bound glycerol molecule models the binding of the glucose substrate, with its O1 atom hydrogen bonded to the essential acid/base catalyst, Tyr269, and C1 only 3 A from C4 of the nicotinamide. In the glucose-soaked structure, preGFOR(glu), we identify a conformational change of the nearby Lys181 that probably results from the oxidation of glucose to gluconolactone, and functions to prevent rebinding of glucose prior to the binding of fructose. In this conformational change, the Lys181 side chain moves closer to the nicotinamide ring, stabilized by its increased negative charge.

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Year:  2001        PMID: 11705375     DOI: 10.1021/bi011355d

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

Review 1.  Structural and functional features of the NAD(P) dependent Gfo/Idh/MocA protein family oxidoreductases.

Authors:  Helena Taberman; Tarja Parkkinen; Juha Rouvinen
Journal:  Protein Sci       Date:  2016-02-01       Impact factor: 6.725

2.  Multiple precursor proteins bind individual Tat receptor complexes and are collectively transported.

Authors:  Xianyue Ma; Kenneth Cline
Journal:  EMBO J       Date:  2010-03-25       Impact factor: 11.598

3.  PvdN Enzyme Catalyzes a Periplasmic Pyoverdine Modification.

Authors:  Michael T Ringel; Gerald Dräger; Thomas Brüser
Journal:  J Biol Chem       Date:  2016-10-04       Impact factor: 5.157

4.  The structure of substrate-free 1,5-anhydro-D-fructose reductase from Sinorhizobium meliloti 1021 reveals an open enzyme conformation.

Authors:  Mario Schu; Annette Faust; Beata Stosik; Gert Wieland Kohring; Friedrich Giffhorn; Axel J Scheidig
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-27

5.  Genetic selection for protein solubility enabled by the folding quality control feature of the twin-arginine translocation pathway.

Authors:  Adam C Fisher; Woojin Kim; Matthew P DeLisa
Journal:  Protein Sci       Date:  2006-02-01       Impact factor: 6.725

6.  Signal peptide-chaperone interactions on the twin-arginine protein transport pathway.

Authors:  Kostas Hatzixanthis; Thomas A Clarke; Arthur Oubrie; David J Richardson; Raymond J Turner; Frank Sargent
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-07       Impact factor: 11.205

7.  Gal80 dimerization and the yeast GAL gene switch.

Authors:  Vepkhia Pilauri; Maria Bewley; Cuong Diep; James Hopper
Journal:  Genetics       Date:  2005-02-03       Impact factor: 4.562

8.  Two structures of a thiazolinyl imine reductase from Yersinia enterocolitica provide insight into catalysis and binding to the nonribosomal peptide synthetase module of HMWP1.

Authors:  Kathleen M Meneely; Audrey L Lamb
Journal:  Biochemistry       Date:  2012-10-23       Impact factor: 3.162

9.  Identification, functional characterization, and crystal structure determination of bacterial levoglucosan dehydrogenase.

Authors:  Masayuki Sugiura; Moe Nakahara; Chihaya Yamada; Takatoshi Arakawa; Motomitsu Kitaoka; Shinya Fushinobu
Journal:  J Biol Chem       Date:  2018-09-17       Impact factor: 5.157

10.  Structural basis of L-glucose oxidation by scyllo-inositol dehydrogenase: Implications for a novel enzyme subfamily classification.

Authors:  Kazuhiro Fukano; Kunio Ozawa; Masaya Kokubu; Tetsu Shimizu; Shinsaku Ito; Yasuyuki Sasaki; Akira Nakamura; Shunsuke Yajima
Journal:  PLoS One       Date:  2018-05-25       Impact factor: 3.240

  10 in total

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