Literature DB >> 11701654

A new approach to decoding life: systems biology.

T Ideker1, T Galitski, L Hood.   

Abstract

Systems biology studies biological systems by systematically perturbing them (biologically, genetically, or chemically); monitoring the gene, protein, and informational pathway responses; integrating these data; and ultimately, formulating mathematical models that describe the structure of the system and its response to individual perturbations. The emergence of systems biology is described, as are several examples of specific systems approaches.

Mesh:

Year:  2001        PMID: 11701654     DOI: 10.1146/annurev.genom.2.1.343

Source DB:  PubMed          Journal:  Annu Rev Genomics Hum Genet        ISSN: 1527-8204            Impact factor:   8.929


  350 in total

1.  Reverse engineering gene networks using singular value decomposition and robust regression.

Authors:  M K Stephen Yeung; Jesper Tegnér; James J Collins
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-30       Impact factor: 11.205

2.  Monitoring global messenger RNA changes in externally controlled microarray experiments.

Authors:  Jeroen van de Peppel; Patrick Kemmeren; Harm van Bakel; Marijana Radonjic; Dik van Leenen; Frank C P Holstege
Journal:  EMBO Rep       Date:  2003-04       Impact factor: 8.807

Review 3.  Molecular mechanisms of irradiation-induced apoptosis.

Authors:  Lei Zhou; Rong Yuan; Lanata Serggio
Journal:  Front Biosci       Date:  2003-01-01

4.  Delivering bioinformatics training: bridging the gaps between computer science and biomedicine.

Authors:  Christopher Dubay; James M Brundege; William Hersh; Kent Spackman
Journal:  Proc AMIA Symp       Date:  2002

Review 5.  Human cardiac systems electrophysiology and arrhythmogenesis: iteration of experiment and computation.

Authors:  Katherine M Holzem; Eli J Madden; Igor R Efimov
Journal:  Europace       Date:  2014-11       Impact factor: 5.214

Review 6.  A vision for a biomedical cloud.

Authors:  R L Grossman; K P White
Journal:  J Intern Med       Date:  2012-02       Impact factor: 8.989

7.  Comparative analysis of multiple genome-scale data sets.

Authors:  Margaret Werner-Washburne; Brian Wylie; Kevin Boyack; Edwina Fuge; Judith Galbraith; Jose Weber; George Davidson
Journal:  Genome Res       Date:  2002-10       Impact factor: 9.043

8.  A first version of the Caenorhabditis elegans Promoterome.

Authors:  Denis Dupuy; Qian-Ru Li; Bart Deplancke; Mike Boxem; Tong Hao; Philippe Lamesch; Reynaldo Sequerra; Stephanie Bosak; Lynn Doucette-Stamm; Ian A Hope; David E Hill; Albertha J M Walhout; Marc Vidal
Journal:  Genome Res       Date:  2004-10       Impact factor: 9.043

9.  Human ORFeome version 1.1: a platform for reverse proteomics.

Authors:  Jean-François Rual; Tomoko Hirozane-Kishikawa; Tong Hao; Nicolas Bertin; Siming Li; Amélie Dricot; Ning Li; Jennifer Rosenberg; Philippe Lamesch; Pierre-Olivier Vidalain; Tracey R Clingingsmith; James L Hartley; Dominic Esposito; David Cheo; Troy Moore; Blake Simmons; Reynaldo Sequerra; Stephanie Bosak; Lynn Doucette-Stamm; Christian Le Peuch; Jean Vandenhaute; Michael E Cusick; Joanna S Albala; David E Hill; Marc Vidal
Journal:  Genome Res       Date:  2004-10       Impact factor: 9.043

Review 10.  Integrating omics technologies to study pulmonary physiology and pathology at the systems level.

Authors:  Ravi Ramesh Pathak; Vrushank Davé
Journal:  Cell Physiol Biochem       Date:  2014-04-28
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