Literature DB >> 11696191

Establishment of gene-trap and enhancer-trap systems in the moss Physcomitrella patens.

Y Hiwatashi1, T Nishiyama, T Fujita, M Hasebe.   

Abstract

Because of its simple body plan and ease of gene knockout and allele replacement, the moss Physcomitrella patens is often used as a model system for studies in plant physiology and developmental biology. Gene-trap and enhancer-trap systems are useful techniques for cloning genes and enhancers that function in specific tissues or cells. Additionally, these systems are convenient for obtaining molecular markers specific for certain developmental processes. Elements for gene-trap and enhancer-trap systems were constructed using the uidA reporter gene with either a splice acceptor or a minimal promoter. Through a high rate of transformation conferred by a method utilizing homologous recombination, 235 gene-trap and 1073 enhancer-trap lines were obtained from 5637 and 3726 transgenic lines, respectively. The expression patterns of these trap lines in the moss gametophyte varied. The candidate gene trapped in a gene-trap line YH209, which shows rhizoid-specific expression, was obtained by 5' and 3' RACE. This gene was named PpGLU, and forms a clade with plant acidic alpha-glucosidase genes. Thus, these gene-trap and enhancer-trap systems should prove useful to identify tissue- and cell-specific genes in Physcomitrella.

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Year:  2001        PMID: 11696191     DOI: 10.1046/j.1365-313x.2001.01121.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  12 in total

Review 1.  A tool for understanding homologous recombination in plants.

Authors:  A Hohe; R Reski
Journal:  Plant Cell Rep       Date:  2003-05-23       Impact factor: 4.570

2.  Arabinogalactan proteins are required for apical cell extension in the moss Physcomitrella patens.

Authors:  Kieran J D Lee; Yoichi Sakata; Shaio-Lim Mau; Filomena Pettolino; Antony Bacic; Ralph S Quatrano; Celia D Knight; J Paul Knox
Journal:  Plant Cell       Date:  2005-09-30       Impact factor: 11.277

3.  Identification of negative cis-acting elements in response to copper in the chloroplastic iron superoxide dismutase gene of the moss Barbula unguiculata.

Authors:  Miwa Nagae; Masaru Nakata; Yohsuke Takahashi
Journal:  Plant Physiol       Date:  2008-02-07       Impact factor: 8.340

4.  Endogenous diterpenes derived from ent-kaurene, a common gibberellin precursor, regulate protonema differentiation of the moss Physcomitrella patens.

Authors:  Ken-ichiro Hayashi; Keisuke Horie; Yuji Hiwatashi; Hiroshi Kawaide; Shinjiro Yamaguchi; Atsushi Hanada; Tamotsu Nakashima; Masatoshi Nakajima; Lewis N Mander; Hisakazu Yamane; Mitsuyasu Hasebe; Hiroshi Nozaki
Journal:  Plant Physiol       Date:  2010-05-20       Impact factor: 8.340

5.  Kinesins have a dual function in organizing microtubules during both tip growth and cytokinesis in Physcomitrella patens.

Authors:  Yuji Hiwatashi; Yoshikatsu Sato; John H Doonan
Journal:  Plant Cell       Date:  2014-03-18       Impact factor: 11.277

6.  Physcomitrella patens and Ceratodon purpureus, mosses as model organisms in photosynthesis studies.

Authors:  Leeann E Thornton; Nir Keren; Itzhak Ohad; Himadri B Pakrasi
Journal:  Photosynth Res       Date:  2005       Impact factor: 3.573

7.  Targeted site-directed mutagenesis of a heme oxygenase locus by gene replacement in the moss Ceratodon purpureus.

Authors:  Gerhard Brücker; Franz Mittmann; Elmar Hartmann; Tilman Lamparter
Journal:  Planta       Date:  2004-12-02       Impact factor: 4.116

8.  Kinesins are indispensable for interdigitation of phragmoplast microtubules in the moss Physcomitrella patens.

Authors:  Yuji Hiwatashi; Mari Obara; Yoshikatsu Sato; Tomomichi Fujita; Takashi Murata; Mitsuyasu Hasebe
Journal:  Plant Cell       Date:  2008-11-21       Impact factor: 11.277

9.  RMD: a rice mutant database for functional analysis of the rice genome.

Authors:  Jianwei Zhang; Caishun Li; Changyin Wu; Lizhong Xiong; Guoxing Chen; Qifa Zhang; Shiping Wang
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

10.  An Ac/Ds-mediated gene trap system for functional genomics in barley.

Authors:  Katina Lazarow; Stephanie Lütticke
Journal:  BMC Genomics       Date:  2009-01-29       Impact factor: 3.969

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