Literature DB >> 15578218

Targeted site-directed mutagenesis of a heme oxygenase locus by gene replacement in the moss Ceratodon purpureus.

Gerhard Brücker1, Franz Mittmann, Elmar Hartmann, Tilman Lamparter.   

Abstract

The moss Physcomitrella patens is so far the only plant species in which it is possible for nuclear genes to be modified by homologous recombination at a reasonably efficiency. Here we describe the use of homologous recombination for another moss, Ceratodon purpureus. Our approach is based on the repair of the ptr116 mutant allele. In this mutant, codon 31 of the heme oxygenase gene CpHO1 is mutated to a stop codon. Heme oxygenase is necessary for the conversion of heme to biliverdin, the precursor of the phytochrome chromophore. Thus, in ptr116 the phytochrome-mediated responses of phototropism, chlorophyll accumulation and branching are lost. Protoplast transformation with DNA encoding the wild-type protein resulted in a rescue of 0.8% of regenerated protoplasts. In about half of the analyzed lines, formation of CpHO1 concatemers was observed at the CpHO1 locus, whereas in the other half, the mutant CpHO1 gene was replaced by a single DNA copy. This gene repair led to the exchange of single bases, and thus provides the first demonstration of efficient site-directed mutagenesis in a plant nuclear genome. Our studies also revealed an effective mechanism for gene inactivation in Ceratodon. When wild-type protoplasts were transformed with intact or modified CpHO1 genes, approximately 40% of regenerated protoplasts showed the ptr phenotype.

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Year:  2004        PMID: 15578218     DOI: 10.1007/s00425-004-1411-6

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  23 in total

1.  Targeted manipulation of maize genes in vivo using chimeric RNA/DNA oligonucleotides.

Authors:  T Zhu; D J Peterson; L Tagliani; G St Clair; C L Baszczynski; B Bowen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  Blue light- and genetically-reversed gravitropic response in protonemata of the moss Ceratodon purpureus.

Authors:  T Lamparter; J Hughes; E Hartmann
Journal:  Planta       Date:  1998-09       Impact factor: 4.116

3.  ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites.

Authors:  O Emanuelsson; H Nielsen; G von Heijne
Journal:  Protein Sci       Date:  1999-05       Impact factor: 6.725

4.  Efficient gene targeting in the moss Physcomitrella patens.

Authors:  D G Schaefer; J P Zrÿd
Journal:  Plant J       Date:  1997-06       Impact factor: 6.417

5.  Efficient gene targeting by homologous recombination in rice.

Authors:  Rie Terada; Hiroko Urawa; Yoshishige Inagaki; Kazuo Tsugane; Shigeru Iida
Journal:  Nat Biotechnol       Date:  2002-09-09       Impact factor: 54.908

6.  Isolation of an efficient actin promoter for use in rice transformation.

Authors:  D McElroy; W Zhang; J Cao; R Wu
Journal:  Plant Cell       Date:  1990-02       Impact factor: 11.277

7.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

Review 8.  Gene targeting in Physcomitrella patens.

Authors:  D G Schaefer
Journal:  Curr Opin Plant Biol       Date:  2001-04       Impact factor: 7.834

9.  The Arabidopsis photomorphogenic mutant hy1 is deficient in phytochrome chromophore biosynthesis as a result of a mutation in a plastid heme oxygenase.

Authors:  T Muramoto; T Kohchi; A Yokota; I Hwang; H M Goodman
Journal:  Plant Cell       Date:  1999-03       Impact factor: 11.277

10.  Gene targeting in Arabidopsis.

Authors:  M Hanin; S Volrath; A Bogucki; M Briker; E Ward; J Paszkowski
Journal:  Plant J       Date:  2001-12       Impact factor: 6.417

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  10 in total

1.  Negative phototropic response of rhizoid cells in the fern Adiantum capillus-veneris.

Authors:  Hidenori Tsuboi; Noriyuki Suetsugu; Masamitsu Wada
Journal:  J Plant Res       Date:  2006-08-30       Impact factor: 2.629

2.  Analysis of the phytochrome gene family in Ceratodon purpureus by gene targeting reveals the primary phytochrome responsible for photo- and polarotropism.

Authors:  Franz Mittmann; Sven Dienstbach; Andrea Weisert; Christoph Forreiter
Journal:  Planta       Date:  2009-03-28       Impact factor: 4.116

3.  Phytochrome-mediated regulation of cell division and growth during regeneration and sporeling development in the liverwort Marchantia polymorpha.

Authors:  Ryuichi Nishihama; Kimitsune Ishizaki; Masashi Hosaka; Yoriko Matsuda; Akane Kubota; Takayuki Kohchi
Journal:  J Plant Res       Date:  2015-04-05       Impact factor: 2.629

4.  Assembly of synthetic locked phycocyanobilin derivatives with phytochrome in vitro and in vivo in Ceratodon purpureus and Arabidopsis.

Authors:  Rui Yang; Kaori Nishiyama; Ayumi Kamiya; Yutaka Ukaji; Katsuhiko Inomata; Tilman Lamparter
Journal:  Plant Cell       Date:  2012-05-11       Impact factor: 11.277

5.  A linkage map reveals a complex basis for segregation distortion in an interpopulation cross in the moss Ceratodon purpureus.

Authors:  Stuart F McDaniel; John H Willis; A Jonathan Shaw
Journal:  Genetics       Date:  2007-07-01       Impact factor: 4.562

Review 6.  Oxylipins in moss development and defense.

Authors:  Inés Ponce de León; Mats Hamberg; Carmen Castresana
Journal:  Front Plant Sci       Date:  2015-07-03       Impact factor: 5.753

7.  High contents of very long-chain polyunsaturated fatty acids in different moss species.

Authors:  Anna K Beike; Carsten Jaeger; Felix Zink; Eva L Decker; Ralf Reski
Journal:  Plant Cell Rep       Date:  2013-10-30       Impact factor: 4.570

8.  Testing of Auxotrophic Selection Markers for Use in the Moss Physcomitrella Provides New Insights into the Mechanisms of Targeted Recombination.

Authors:  Mikael Ulfstedt; Guo-Zhen Hu; Monika Johansson; Hans Ronne
Journal:  Front Plant Sci       Date:  2017-11-03       Impact factor: 5.753

9.  Plastid genome analysis of three Nemaliophycidae red algal species suggests environmental adaptation for iron limited habitats.

Authors:  Chung Hyun Cho; Ji Won Choi; Daryl W Lam; Kyeong Mi Kim; Hwan Su Yoon
Journal:  PLoS One       Date:  2018-05-08       Impact factor: 3.240

10.  A computational approach to discovering the functions of bacterial phytochromes by analysis of homolog distributions.

Authors:  Tilman Lamparter
Journal:  BMC Bioinformatics       Date:  2006-03-16       Impact factor: 3.169

  10 in total

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